Xenopus laevis (African clawed frog): 108698191
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Entry
108698191 CDS
T01010
Symbol
notch1.L
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108698191 (notch1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
DL-JAG_EGF-like
cEGF
DUF4317
Motif
Other DBs
NCBI-GeneID:
108698191
NCBI-ProteinID:
XP_018084977
Xenbase:
XB-GENE-17342057
UniProt:
A0A1L8F627
A0A974C5I0
LinkDB
All DBs
Position
8L:complement(4294075..4345933)
Genome browser
AA seq
2521 aa
AA seq
DB search
MDRIGLLVLLCFLPVLTQGLRCTQTTEMCLNGGRCETSPGGTGVCLCGSYYFGERCQFSN
PCATKNQCMNLGTCEPVLQGNAVDFICHCPVGFTDKVCLTPVDNACVNNPCRNGGTCELL
SSVTEYKCRCPPGWTGDSCQQADPCASNPCANGGKCLPFEIQYICRCPPGFHGATCKQDI
NECSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCEETYVPCNPSPCLNGGTCRQTDDTSY
ECTCLPGFNGQNCEENIDDCPSNKCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQL
MPNACQNGGTCHNTYGGYNCVCVNGWTGEDCSENIDDCANAACHSGATCHDRVASFYCEC
PHGRTGLLCHLDNACISNPCNEGSNCDTNPVNGKAICTCPPGYTGPACNNDVDECSLGAN
PCEHGGRCTNTLGSFQCNCPQGYAGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPG
YEGLYCETNINECASSPCLHNGKCIDKINEFHCECPPGFKGILCQQDVDECTSTPCKNGA
KCLDGPNSYTCQCTEGFTGRHCEQDINECVPDPCHYGTCKDGIATFTCLCLPGYMGRLCD
KDINECISAPCQYGGQCTDRENGYICTCPKGTTGVNCETNLDDCASNPCDYGKCIDKIDG
YECTCEPGYTGKMCNININECVSNPCRNGGTCKDKINGFTCVCPDGYHDHMCLSEVNECN
SNPCIHGTCHDGVNGYKCDCEAGWSGSNCDINNNECDSNPCMNGGTCKDMTGAYICTCKA
GFSGPNCQTNINECASNPCLNHGTCIDDVAGYKCNCMLPYTGAICEAVLAPCAGSPCKNG
GRCKESEDYETFSCECPPGWQGQTCEIDMNECVNRPCRNGATCQNTNGSYKCNCKPGYTG
RNCETDIDDCQPNPCHNGGSCSDGINTFFCNCPAGFRGPKCEEDINECASNPCKNGANCT
DCVNSYTCTCQPGFSGIHCENNTPDCTESSCFNGGTCIDGINTFTCQCPPGFTGNYCQHD
INECDSKPCLNGGTCQDSYGAYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNFY
RCECKSGWTGVYCDVPSVSCEVAAKQQGVDIAHLCRNSGMCVDTGNTHFCRCQAGYMGSY
CEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDL
INTYKCSCPRGTQGVHCEINVDDCTPFYDSFSLEPKCFNNGKCIDRVGGYNCICPPGFVG
ERCEGDVNECLSNPCDSRGTQNCIQLVNDYRCECRQGFTGRRCDSVVDGCKGLPCRNGGT
CAVASNTERGFICKCPPGFDGATCEYDSRTCGNLRCHNGGTCISVLKSSKCVCSEGFTGA
TCQYPVISPCASHPCYNGGTCQFLAEEPFFQCFCPKNFNGLFCHILDYGFPGGLGKNIIP
PDNEDICENEQCAELADNKVCNANCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFND
GKCDSQCNNTGCLYDGFDCQKVEVQCNPLYDQYCKDHFQDGHCDQGCNNAECEWDGLDCA
NMPENLAEGTLMLVILMSPEKLKNNSVNFLRELSRVLHTNVVFKKDNNGEFKIYPYYGNA
EELKKHHIKRSADYWSDAPSAIFSTVKESILPGRRRRELDQMEIRGSIVYLEIDNRQCYK
SSSQCFNSATDVAAFLGALASLGNLDNLPYKIEAVKSEVVETPKPSSLYPMLSMLVIPLL
IIFVFMVVIVNKKRRREHGQLWFPEGFIPKEPSKKKRREPLGEDSVGLKPLKNMTDVSFM
DDNQNEWGDEETLENKRFRFEEQVMLPELVDDQMDHRQWTQQHLDAADLRISSMAPTPPQ
GEIDADCMDVNVRGPDGFTPLMIAACSGGGLETGNNEEEEDASANMISDFIGQGAQLHNQ
TDRTGETALHLAARYARADAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQILIRN
RATDLDARMVDGTTPLILAARLAVEGMVEELINAHADVNAVDEFGKSALHWAAAVNNVDA
ATVLLKNSANKDMQNNKEETPLFLAAREGSYETAKVLLDHYANRDITDHMDRLPRDIAQE
RMHHDIVHLLDEYNLVKSPTLHNGPLGAQTLSPICSPNGYMGNMKPSVQSKKARKPSIKA
NGCKEAKELKGRRKKSQDGKTTLLDSGSSGVLSPVDSLESPHGYLSDVSSPPLMTSPFQQ
SPSMPLNHLTSMPESHLGMNHMNMATKQEMASSNRMAFDGMTPRLTHLNASSPNTIMSNG
SMHFTVGGAPAMNGQCDWLARLQNGMVQNQYNPIRSGIQQGNAQQAQALQHGLMSSLHNG
LPATTLSQMMTYQAMPNTRLANQPHLMQAQQMQQQLHHNMQQQQQQHHNSNTTSTHINSP
FCSSDINQTDLQQMSSNNIHSVMPQDTQIFATSLPSNLAQSMTTTQFLTPPSQHSYSSPI
DNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNMSDWSEGISSPPTSLQPQRSHIPEAF
K
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atggatcggatagggctgcttgtgctgctctgcttcttgcctgtcctcacacaaggtcta
cgatgcactcagactacagaaatgtgcctgaacggcgggaggtgcgaaacaagccctggc
ggaactggggtgtgcctatgcggtagttattatttcggcgaaaggtgccagttctccaat
ccctgcgccacaaagaatcagtgtatgaacttgggaacctgtgagcctgtgctgcaaggg
aatgccgtagacttcatctgccactgccccgtgggtttcaccgacaaagtgtgtctgact
cccgtggataacgcctgcgtcaacaacccgtgccggaatggaggaacctgtgagctcctc
agcagtgtgaccgaatacaagtgcaggtgtcccccgggatggacaggtgattcgtgccag
caggcagatccgtgtgcctccaatccatgtgccaatggcgggaagtgtttgccctttgag
atccagtatatctgcaggtgtccccctgggttccacggagctacctgcaagcaggacatt
aatgagtgcagccaaaatccctgcaagaatggcggccagtgcatcaatgagtttggatca
taccgctgcacctgtcagaacaggtttactggaaggaactgcgaggagacgtatgtcccc
tgcaacccatcgccgtgcctgaatggagggacctgccggcaaactgacgacacctcctat
gagtgcacctgtcttccaggcttcaacggacagaactgcgaagagaacattgacgactgc
ccgagtaacaagtgccgcaacggtgggacctgcgtggatggagtcaacacctacaattgc
cagtgtccacctgactggacaggccagtactgcacagaggatgtggacgagtgccaactg
atgccgaacgcttgccaaaatgggggaacctgccacaacacctacggtggatacaactgt
gtttgtgtcaacggctggactggagaggactgcagcgagaacatcgacgattgtgccaac
gccgcctgccatagtggtgccacctgtcacgatcgcgtggcgtctttttactgcgagtgc
ccacacggccggacaggtctcctttgtcacctggataatgcctgtatcagcaatccctgc
aacgagggctccaactgtgacaccaacccagtcaatgggaaagccatctgcacttgccca
ccggggtacaccggcccggcttgcaacaacgatgtggatgagtgttctctgggtgccaat
ccgtgtgagcatggtgggagatgtaccaacaccctcggttccttccagtgcaattgccct
cagggatatgcaggaccccgctgtgagattgacgtcaacgaatgtctctccaacccatgc
caaaatgatgccacatgcctggaccagattggagagttccagtgtatatgtatgccaggt
tacgaaggcctttactgtgaaaccaacatcaatgaatgtgccagcagcccctgcctacat
aatggcaagtgcatcgataaaatcaacgagttccactgcgagtgtcccccaggcttcaaa
ggaattctctgccagcaagatgtcgacgagtgtaccagcactccgtgcaaaaatggagcc
aaatgcttggatggcccaaattcttacacctgccaatgtacagaaggtttcaccgggcgc
cactgtgaacaagacatcaatgaatgcgtccccgatccgtgccactacggcacctgcaaa
gacggaattgccaccttcacgtgcctgtgcctgcctgggtacatgggacgtctgtgtgac
aaggacatcaacgagtgcataagtgcgccgtgccaatacgggggtcagtgtacagaccga
gagaacggctacatatgcacttgtccgaaaggaaccacgggtgtgaattgcgaaaccaat
ctagacgactgcgccagtaacccgtgcgattatggaaaatgcattgacaagattgatggc
tacgagtgcacctgcgagcctggctacacaggcaagatgtgcaatattaacattaacgaa
tgtgtcagcaatccgtgccgcaatggtgggacatgcaaagacaagatcaatggcttcaca
tgtgtgtgcccagatgggtaccatgaccacatgtgcctgtctgaagtgaacgaatgcaac
agcaatccgtgtatccacgggacgtgccatgatggagtcaatgggtacaaatgtgactgt
gaggcaggatggagcggtagcaattgtgacatcaacaacaacgaatgcgactccaacccg
tgtatgaatggcggtacctgcaaagacatgacaggggcctacatctgcacctgcaaagca
ggatttagtgggccaaactgccaaactaacatcaacgaatgtgcctccaacccctgcttg
aatcatggaacgtgtatcgatgatgtagctggctacaaatgcaactgcatgttgccttat
acaggggccatttgtgaggccgttttggcgccgtgcgcaggcagtccttgtaaaaatggc
ggcaggtgtaaggaatcggaagattatgaaaccttctcttgcgaatgtccacccggttgg
caagggcaaacgtgtgagatcgacatgaatgaatgcgtcaatcgcccttgccggaacgga
gcaacgtgccagaacaccaacggcagttacaagtgcaactgcaaacctggttacaccggg
cgcaactgcgagacagacattgatgactgccaaccaaacccttgtcacaatggaggatcc
tgttctgacggcatcaacacgtttttctgtaactgcccggccgggttccgggggccaaag
tgcgaagaggacatcaatgagtgcgccagtaacccgtgcaaaaatggagccaactgtacg
gattgtgtaaacagctacacgtgcacctgccagcctggatttagtggcatccactgcgaa
aataacacccctgactgcaccgagagctcatgctttaatggcggcacctgcatcgatggg
atcaatacatttacatgccagtgtcctcctggatttaccggaaactactgccaacatgat
atcaacgaatgcgactccaaaccttgtctgaacggaggcacctgccaggacagttatggg
gcgtacaagtgcacctgtccacaaggatacacagggctcaactgccagaacttggtgcgt
tggtgcgactcttctccttgtaagaatggaggaaagtgctggcagaccaacaacttttat
cgttgtgagtgcaagagcggctggactggtgtttactgtgatgtccccagtgtctcctgc
gaggttgccgctaagcagcaaggtgtggatatcgctcatctgtgtcgcaattctggcatg
tgcgtggacactggaaacacgcatttctgccgctgtcaggctggctacatgggcagttac
tgcgaggaacaggtggatgaatgctcgccgaatccctgccagaacggtgccacgtgcaca
gattacctgggcggctactcgtgcgagtgtgttgccggctaccacggagttaactgctca
gaagaaatcaatgagtgtttgtcccatccgtgccagaatggaggaacttgtattgatctc
attaacacctacaaatgctcctgccccagaggaactcaaggcgttcactgtgaaatcaac
gtggatgactgcactcccttctacgactccttcagcttggaacccaagtgcttcaacaat
ggcaaatgtatagaccgcgtgggaggctataactgcatctgccctccaggctttgtaggg
gaacgctgtgaaggcgacgtgaacgagtgcctatctaatccctgtgactcccgtgggacc
cagaactgcatccagctggtgaatgattaccgctgcgagtgccggcagggattcacagga
aggcgctgtgactctgttgtggacggttgcaagggattgccctgccgaaatggaggaaca
tgtgccgtcgccagcaatacagagcgtggctttatctgcaaatgccctcctgggtttgac
ggagccacttgcgagtatgattcacgaacctgcggtaaccttcgctgccacaatggcggc
acttgcatttcggtgctgaagagttccaaatgcgtgtgctccgaaggctttactggcgcc
acatgtcagtaccctgttattagtccttgtgcttcccacccttgttacaatggaggaacc
tgccagttcttagccgaggaacctttcttccaatgcttctgccccaagaactttaacggg
ctcttctgccatatcttggattacggctttcccggaggactgggcaagaatattatcccc
cctgataacgaagatatctgtgaaaacgagcagtgcgccgagctggccgacaacaaggtc
tgcaacgccaactgcaacaaccacgcttgcggatgggatggcggagactgctcgctcaac
ttcaacgacccatggaagaactgcacccagtcgctgcagtgttggaaatacttcaacgat
ggcaaatgcgattctcagtgcaacaacaccgggtgtctgtacgacgggttcgactgccag
aaagtcgaggttcagtgcaacccattgtatgaccagtattgcaaggatcactttcaagat
ggccactgcgaccaaggctgtaacaatgctgagtgtgaatgggatggcctggactgcgcc
aacatgccagagaacctagctgaaggcaccctgatgttggtcatcctcatgtctcctgaa
aagcttaagaacaactccgtcaatttcctccgtgagctgagccgagtgctccacacaaac
gtggtgttcaagaaggacaacaacggggaattcaagatctacccttactatggcaatgcg
gaagaacttaaaaaacatcacattaagaggtcggctgattactggtcggacgctccttca
gccatcttcagcacagtgaaagaatccattttaccaggaaggcgtcgcagggagttggac
cagatggaaattagggggtcgatcgtatacttggaaatagacaaccgtcagtgctacaaa
tcctcctcccagtgtttcaacagcgctacagatgttgccgctttccttggagctttggcc
tcccttgggaacctggacaacctcccctataagattgaggctgtgaaaagtgaggtcgtg
gagacccccaagccctcttctctctatcccatgctctccatgttggtcattccgttatta
atcatcttcgtcttcatggtggtcatcgtgaataagaagcgtcggcgcgaacacggacag
ctttggttccccgagggcttcattcctaaagagcccagcaaaaagaaacggcgagagccc
ctcggggaggattcagttggcttaaaacccctcaagaacatgactgatgtctcttttatg
gatgacaatcagaatgaatggggagatgaagagaccctggaaaacaagaggttcaggttt
gaagagcaagtcatgctcccggaacttgttgatgaccaaatggaccaccggcagtggaca
cagcagcaccttgatgctgccgacctgcgcatttcatccatggccccaacaccgccgcaa
ggagagattgatgctgactgcatggacgtcaatgtccgcggccctgatggcttcacccca
cttatgatcgccgcttgcagcggaggcggattagagactggaaacaatgaagaggaagag
gatgcttctgccaacatgatttccgacttcatcggccagggtgcccaactgcataaccaa
accgaccgcactggtgagacggcgcttcaccttgccgcgagatacgctcgtgctgacgca
gccaagcgcctcttggagtcaagcgcagacgctaatgtccaggacaacatgggccggact
cctctccatgcagcggtggcggctgatgctcagggtgtattccagattctcattcggaac
cgagcgacagacttggacgcccgcatggtcgatggcactacccccctgatcctggccgct
cggctggctgtggaagggatggtggaggagcttatcaacgctcatgcagatgtcaatgct
gttgatgaatttggaaaatctgctttgcattgggcagcggctgtgaataacgttgatgct
gcaactgtgcttctcaagaatagtgcaaataaggacatgcagaacaacaaggaagagacg
cccctgtttttggctgcaagagaaggaagctacgaaactgccaaagtccttctggatcac
tacgccaaccgtgacatcacagaccacatggatcggctgcctcgcgacatcgcccaggaa
cgcatgcaccacgatattgttcacctgctggacgagtataacctcgtgaagagcccgacg
ctgcacaatggtccattaggagcacagacattatctcccatctgctcccctaacggttac
atggggaacatgaagccttcggttcagagcaagaaagcccgcaagcccagtatcaaagcc
aatggctgcaaagaggccaaagagctgaaaggcaggaggaaaaagtctcaagatgggaaa
actactctcttggattcgggtagctccggagtgttgtccccggtggactccttggagtcg
ccccatggatacttatcggacgtgtcttctcctccgttgatgacctctccattccagcag
tctccctccatgcctctgaaccacctgaccagcatgcctgagtcccaccttggcatgaat
cacatgaacatggccaccaagcaggaaatggcaagttccaatcgaatggcttttgatggc
atgaccccacgcctgacccacctcaatgcctcaagccctaataccatcatgagcaatgga
tccatgcattttacagtgggaggagctccggctatgaacggccaatgtgactggttagca
aggctgcagaacgggatggtccagaatcagtacaacccaatcagaagcggcatccaacaa
ggcaacgcccagcaagcgcaagctcttcagcatggccttatgagctcactccataatggt
cttccagcaacaactctctcccaaatgatgacctatcaggccatgcccaacacaaggcta
gccaatcagcctcatctaatgcaagcccagcaaatgcaacagcagctgcaccacaacatg
cagcagcagcagcaacaacatcacaattccaacacgacttctactcatatcaactcgcca
ttctgcagcagcgacataaaccagacggacctgcaacagatgtcaagcaacaacattcat
tcagtaatgccccaggacacacagatatttgccacctctctaccatccaatcttgcccaa
tcaatgacaaccacgcagtttttaaccccgccttcccagcatagctactcctcccccata
gacaatacaccaagccatcaactacaagtgccagaccaccccttcctgacgccttctcct
gagtcacctgaccagtggtcaagctcctcccctcattccaatatgtctgactggtcagaa
ggaatatccagccctcccaccagtctgcagcctcagcgctcccacatacccgaagccttc
aagtaa
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integrated database retrieval system
