Xenopus laevis (African clawed frog): 108702800
Help
Entry
108702800 CDS
T01010
Symbol
grin2c.S
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04020
Calcium signaling pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108702800 (grin2c.S)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108702800 (grin2c.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108702800 (grin2c.S)
Ion channels [BR:
xla04040
]
Ligand-gated channels
Glutamate (ionotropic)
108702800 (grin2c.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
MatE
Na_Pi_cotrans
Motif
Other DBs
NCBI-GeneID:
108702800
NCBI-ProteinID:
XP_018093987
Xenbase:
XB-GENE-17342904
UniProt:
A0A1L8EMV1
LinkDB
All DBs
Position
9_10S:complement(38922043..38945905)
Genome browser
AA seq
1189 aa
AA seq
DB search
MILVVWGLLLTVLGCSAVVMETLLPRGGGPVLNVALVFGGSFPYSELVGPIMPEGSLSLP
LDIHTVTVLVNDSGPAPLLRQLCQALRGAHAVIFQDNIGTEAVAQILDFISSQTLVPIIS
ISGGSAVVLSPKETSSSFLQMAASLEQQLTVILKVLEEYDLGPFSVITSHYPGHRLFLRA
VRALCEALQPGWGPQDELIVEPGAGPKETQKILRQVSAPVLLLFCSREEAEEMFIAAGEA
GLLGPSHIWIVPSFTIGSPDHPAPFFPVGLVSVVTEGWRRSLRRKLQDGIAVIAAGAKNY
LQRHGELPQPRGSCLMPPQLHGNNTLYRHMMNTVWRDRELSFNSQGYLLDPSMLVITLSP
HHVWEEVGRWESGIIQMKYPVWPRYGAGNQLVTDSRHLTVATLEERPFVIVESTDPATGD
CIRNTVPCRKQSNLTLSSSGEPYTKLCCKGFCIDILKKLARTVKFSYDLYLVTNGKHGKL
VRGMWNGMIGEVYYRRAHLAIGSLTINEERSEIIDFSVPFVETGISVLVSRSNGTVSPSA
FLEPYSPAVWMMMFLMCLSVVAVTVFSFEYLSPMGYDQDLSNGKRLGGPSFTIGKSLWLL
WALVFNNSVPIQNPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDR
KFQKPQEHYPPFRFGTVPNGSTERNIRTNYPDMHSYMVRYNQRSVEDALASLKAGKLDAF
IYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNSRWKRPIDLALLQFLGDGDT
QRLETVWLSGICQNEKNEAVSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLVYWRMRHC
MPSSCGEKGLLGISRGIYSCFRGVESPLQDSQFPDPDVTGTPVPVNVLRVLQTARDLVSS
SGVGGSLENASQALRTWKQRSESLQAAFSLQGPQAIASPHHMATTAMVGNVGPTMAVPIL
TQSPRSFHPSYPVLADGDLQPPEINSLPLQDFHPVSSISQNGGVSTAVHSSNPCIISPLP
QRRQESPQMLPNPSCAGGLQYPGTWYQSPTPRQVVRSSLLPHETLLAEDCGMHPRCVRPL
HYSLPRASHLCTFCHSGGCHRLDPALYSSPHPDAPLRGAVSTLAVPSAMTYRDSGSLLNV
ASLGRTACCSKIASSRYPTGSLSGTFRSEISGNINLADSCRRISWESEV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgattttggtcgtgtgggggctcctgctgactgtgcttggctgcagtgcggtggtgatg
gagactttgctgcctcgaggtggaggacctgtattgaatgtggcccttgtttttggaggc
tcctttccatatagtgagcttgttggacctattatgccagaaggctccctttcccttccc
ttggatatccacaccgtcactgtgcttgtgaatgatagtggccctgctccgctcctgaga
cagttatgccaagcactgaggggggctcatgctgtgatattccaggataatatcggcaca
gaggctgtggcgcaaatccttgactttatctcctcacaaaccctcgtacctatcatcagc
atcagtggcggctctgctgtggtcctgagtccaaaggaaaccagttcctccttcctgcag
atggcagcttctttagagcagcagttgactgttattctaaaggtgctagaggaatatgat
cttggacctttttctgtgatcaccagtcactatcctgggcatcggctcttcctcagggct
gtgcgggctctttgtgaagctctacagcctggctggggaccacaggatgaactcatagtg
gagccaggtgcaggtcccaaagagactcagaaaatcctccggcaagtatctgctccagtt
cttttgctattttgctcaagagaggaggcagaagagatgtttattgcagcgggtgaagcc
ggactcctaggacctagtcacatatggattgtcccaagctttaccattgggtctccagac
catcctgccccatttttccctgtaggattggtaagtgtagtgactgagggctggaggaga
agcctgcgaaggaagctacaggacgggatagcagtgattgctgcaggagccaagaactac
ctgcaaagacatggagaactgccacagccaaggggaagttgcctaatgccaccacaactg
cacggaaacaacaccctgtacaggcatatgatgaacacagtatggagggacagagagctg
tctttcaattctcagggatatttactggatccttccatgctggtgataacactgagtcct
catcatgtatgggaagaggtgggacgatgggagagcggaatcattcagatgaagtatcca
gtatggcctcgttatggagctggtaaccagcttgtgacagactctcgtcacctgacagtg
gccacacttgaggagaggccatttgtcattgttgagagtacagacccagctacgggagac
tgtatccggaacacagtgccatgccgcaagcagagcaacctgacgctgagcagttccggg
gagccatacacaaagttatgctgcaaaggtttctgcattgacatcctgaagaagctggcc
cgcacagtaaagttctcgtatgacctttacctggtgactaatgggaagcatgggaagctt
gtgcgaggcatgtggaatggaatgattggagaggtctattatcgccgtgctcatctcgct
attgggtctctcactataaatgaggagcggtccgagatcatagatttctcagttcccttt
gtggaaaccggaattagtgtccttgtgtcacgcagcaatggtacagtgtctccttctgcc
ttcttggagccgtacagtcctgctgtctggatgatgatgttcctcatgtgtctctctgtt
gttgccgtcactgtctttagctttgagtatttaagccctatgggatatgaccaagactta
agcaatggcaaaaggttaggagggcctagttttaccatcgggaagtccttgtggctgctc
tgggcactagtgtttaataattcagttcccatccagaacccacgtggcactaccagtaag
atcatggtgctggtctgggctttcttcgctgtcattttcttggccagttacacagccaat
ctggcagctttcatgattcaggagcagtatattgatacagtgtctggtctaagtgacagg
aagtttcagaagccccaggaacactatcccccattccgattcgggactgtgcccaatggc
agcacagagagaaacatccgcaccaactacccggacatgcacagctacatggtgcgctac
aaccaacgctctgtggaagatgcccttgccagtctaaaagcagggaaattggatgccttt
atctatgacgcagccgtactgaattacatggctgggaaggatgaggggtgcaagcttgtg
accatcggaagcgggaaggtttttgccaccacgggttatggcattgcattacagaagaat
tcacgctggaaacgacccattgatctggccttactacagttccttggggacggagacact
cagagactggaaacagtatggctatcaggcatctgtcagaatgagaagaatgaagcagtc
agtagcaagttggacattgacaatatggccggggtcttctacatgctgctggtggccatg
gggctgagtttgctggtcttctcctgggagcacctagtatactggaggatgagacactgt
atgcccagttcttgtggagagaagggtcttttgggaatcagccggggtatttacagctgt
tttcgaggtgtcgagagcccgttgcaggattctcaattcccagatcccgacgtgacaggg
actccagttccagtgaatgttctgagggtcttacagacagccagggaccttgtctcttct
tcaggggttggaggatcactggagaatgcatcccaggcattacgtacttggaaacagcga
agtgagagcctgcaagccgcattctctcttcaggggccgcaagctattgcatcccctcat
cacatggccacaactgcaatggtagggaatgtaggtcccacaatggctgtacctatactt
acccaatccccgcggtcatttcatccttcatatcccgttttggctgatggagacctgcag
cctcctgaaataaattccctgcctctgcaggattttcacccagtatcttccatttctcaa
aatggaggtgtgagcactgctgtgcacagtagtaacccatgtatcatttccccactcccc
cagagaagacaggaatcaccacagatgttgccgaacccttcctgcgcagggggactgcag
taccctgggacttggtaccaatctcccactcctagacaagtagtcagaagttcattacta
ccccatgagaccctgttagctgaagactgcgggatgcacccaaggtgtgtaagacctctg
cactattctcttccacgtgcttcccacctttgcactttttgccacagtgggggatgccac
agacttgatcctgctctgtattcctccccacacccagatgcccccttgagaggagcagtt
tccacactggcagtaccctctgcaatgacctatagagactctggttccctccttaatgta
gcctctcttggaaggactgcatgctgctcaaagatagctagctctaggtaccccaccggc
tccctctcaggaacatttagaagtgaaatcagtgggaatatcaacctggctgactcttgc
aggaggatcagctgggagtctgaggtgtga
DBGET
integrated database retrieval system
