Xenopus laevis (African clawed frog): 108707945
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Entry
108707945 CDS
T01010
Symbol
slc6a4.L
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108707945 (slc6a4.L)
Transporters [BR:
xla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108707945 (slc6a4.L)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
108707945
NCBI-ProteinID:
XP_018101574
Xenbase:
XB-GENE-22062973
UniProt:
A0A974HXN8
A0A1L8HD33
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Position
2L:complement(31505683..31568008)
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AA seq
664 aa
AA seq
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MDRKPTCMESPSLGSEKEPLTCRARSECKKDSQLLRNCKPSLRLSEELNKVHPSPGERGE
PGHISNKYLAVQSPEAPCNGMRNGGDEGSAPTLTVLPACRAEIQHLQTEKGERETWSKKI
DFLLSVIGYAVDLGNVWRFPYVCYQNGGGAFLIPYVIMAVFGGIPLFYMELAIGQYHRNG
CISIWRKICPLFKGIGYSICMIALYVAFYYNTIMAWALYYLMFSFRSELPWTSCLNEWNT
ANCTNYFQNSSVSWSNSSISPAEEFYTRQVLQIHKSKGLHDLGGISWQLTLCLLLIFTVV
YFSIWKGVKTSGKVVWVTATFPYIVLALLLIRGATLPGAWRGVLFYLQPDWEKLLTTAVW
VDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALITSTVNCMTSFMSGLVIFTVLGYM
AEMRNLDVSEVAKDTGPSLLFITYAEAIANMPASTFFAILFFLMLITLGLDSTFAGLEGV
ITAVLDEFPHRWGKRRELFVFLLISACFLGALSTLTFGGAYMVKLFEEYATGPAVLTVVF
LEAIAVSWFYGINQFCRDIKEMLGFTPGWFWKICWVAICPLFLLFIICSFMSSPPDLRLF
NYHYPSWTVVLGYCIGTSSFICVPAYMVYLLTSTPGSIKERFLKSITPEISTEIPLGGIH
MNAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaaccgacctgcatggagagcccatcccttggttctgaaaaggaacctctg
acctgcagggctcggtcagagtgtaaaaaggacagtcagctactgaggaactgcaaaccc
tcattgcgtctctctgaagagctcaacaaggtgcatcccagtccaggagaacgaggagaa
ccagggcatatatccaacaaatacttggctgtgcagagtcctgaggccccttgcaatggc
atgagaaatggcggcgatgaaggctcagcccctacgcttactgtccttccagcttgtaga
gctgagatacagcatctgcaaacggaaaaaggagagagagagacatggagtaaaaaaatt
gactttcttctatctgttattggatatgctgtggacttgggaaatgtgtggagatttcct
tacgtctgttaccagaatggaggaggggcatttcttatcccatatgtgatcatggctgtt
tttggtgggatcccattgttttatatggagctggccatagggcagtatcacaggaatggt
tgtatttctatatggagaaaaatctgtcccttatttaaaggaattggctattctatctgc
atgatcgctctttatgtagcattttattacaacaccattatggcctgggccctctactac
ctcatgttctcattccgctctgagctgccctggaccagctgcctcaatgagtggaacacg
gccaactgcaccaactacttccaaaacagcagcgtcagctggtccaacagctccatctcc
ccagcggaggaattttacacccggcaagtgcttcagatacacaagtcaaaaggtctgcat
gatcttgggggaataagctggcagctcactctctgtctgctcctcatatttacggtcgtc
tacttcagcatatggaaaggggtgaagacatctggcaaggtggtgtgggttactgctacg
tttccttacattgtgcttgccctcctgttaatacgaggagctacgcttcccggtgcttgg
aggggagttcttttctacctgcagcccgactgggagaagcttctaacgactgcggtttgg
gtggatgctgccgcacagatatttttctctcttggcccaggcttcggagtattactggca
ttcgccagctataataaattccacaacaactgctatcaggatgctctgattaccagcaca
gtaaactgtatgacaagtttcatgtctgggttagtcattttcactgtcttgggctacatg
gcagaaatgaggaatttggatgtctcagaagtggccaaagatacaggtcccagcctattg
ttcatcacttatgccgaagccattgcaaatatgccggcgtcaaccttctttgccattcta
ttctttctgatgctaatcactttggggctggatagcacgtttgcagggctggagggggtc
ataaccgcagtgctggatgaattcccacatagatggggaaagcgccgagagctgttcgtc
ttccttctgatctcggcctgcttcctgggggccctttccacgctaacatttggtggtgcc
tacatggtgaagctgtttgaggaatatgccactggccccgcagtactgacagttgtgttt
ctggaggcaattgctgtgtcttggttctatggaatcaaccagttctgcagagatatcaag
gagatgctgggcttcactcctggatggttctggaagatctgctgggtggctatctgcccc
ttgttcctcctgttcatcatttgcagcttcatgtccagccctccggatctacggctcttt
aattaccattatcccagctggactgttgtgctaggctattgcattgggacgtcctcgttc
atctgcgttcctgcgtacatggtgtacctactcacaagcactcctggctcaataaaagag
cgctttttgaagagcattaccccagagatatctacagaaatccccctcggtggcatccac
atgaacgctgtttaa
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