Xenopus laevis (African clawed frog): 108709176
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Entry
108709176 CDS
T01010
Symbol
slc6a4.S
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108709176 (slc6a4.S)
Transporters [BR:
xla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108709176 (slc6a4.S)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
108709176
NCBI-ProteinID:
XP_018104283
Xenbase:
XB-GENE-22062974
UniProt:
A0A1L8H536
A0A974DHN4
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Position
2S:5573782..5647981
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AA seq
664 aa
AA seq
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MDRKPTCIESPSLGSEKEPLTCRARSECKKDGQLLRNCKPSLRLSEELNKVHPSPGERGE
PGNISNKYLAVQSPDAPCNGMRNGGDEGSAPTLIVLPACRAEIQLLQTEIGERETWSKKI
DFLLSVIGYAVDLGNVWRFPYVCYQNGGGAFLIPYVIMAVFGGIPLFYMELAMGQYHRNG
CISIWRKICPLFKGIGYAICMIALYVAFYYNTIMAWALYYLIFSFRSELPWTSCLNEWNT
GNCTNYFQNSSVSWSNSSISPAEEFYTRLVLQIHKSKGLHDLGGISWQLTLCLLLIFIVV
YFSIWKGVKTSGKVVWFTATFPYIVLTLLLIRGATLPGAWRGVLFYLQPDWDKLLTTAVW
VDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFMSGLVIFTVLGYM
AEMRNLDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGV
ITAVLDEFPHIWGKRRELFVFLLISVCFLGSLSTLTFGGAYMVKLFEEYATGPAVLTVVF
LEAIAVSWFYGINQFCRDVREMLGFSPGWFWKICWVAICPLFLLFIICSFMSSPPDLRLF
DYQYPSWTVVLGYCIGTSSFICVPAYMVYLLTSTPGSIKERFLKSITPEISTEIPLGGIH
MNAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaaccgacctgcattgagagcccatctctaggttctgaaaaggaacctctg
acctgcagggctcggtcagagtgtaaaaaggatggacagctactgaggaactgcaaaccc
tcattgcgtctctccgaagagcttaacaaggtgcatcccagtcctggagaaagaggagaa
ccaggaaatatatccaacaaatacttggctgtacagagtcccgatgcaccttgcaatggc
atgagaaatggcggcgatgaaggctcagcccctacacttattgtccttcctgcttgtaga
gctgagatacaacttctgcagacggagataggagaaagagagacatggagtaaaaaaatt
gactttcttctatctgttattggatatgctgtggacctgggaaatgtgtggagatttcct
tacgtctgttaccagaatggaggaggggcatttcttatcccatatgtgatcatggctgtt
tttggtgggatcccattgttttatatggagctggccatgggtcagtatcacaggaatggc
tgcatttctatatggagaaaaatctgtcccttatttaaaggaattggctatgccatctgc
atgatcgctctttatgtcgcattttattacaacaccattatggcctgggctctctactac
ctcatattctcattccgctccgagctgccctggaccagctgcctcaatgagtggaacacg
ggcaactgcaccaactacttccaaaacagcagcgtcagctggtctaacagctccatctcc
cccgcagaggaattttacacccggctagtgcttcagatacacaagtcgaaaggtctgcac
gatcttgggggaatcagctggcagctcactctgtgtctgctcctcatattcattgtggtc
tatttcagcatatggaaaggagtgaaaacatctggcaaggtggtgtggtttacggctaca
tttccttacattgtgctgaccctcctgttaattcgaggagctacacttcctggtgcctgg
aggggagttcttttctacttgcagcccgactgggacaagcttctcactactgcggtctgg
gttgatgctgctgcacagatatttttctctcttggcccgggcttcggagtattacttgca
ttcgccagctacaataaattccacaacaactgttatcaggatgctttggttaccagcaca
gtcaactgtatgacaagtttcatgtccgggttagtcattttcactgtcttgggttacatg
gcagaaatgaggaatctggacgtctcagaagtggccaaagatacaggtcccagcctattg
tttatcacctatgctgaggccattgccaatatgccggcgtctaccttctttgccattata
ttctttctgatgctaatcactttgggtctggacagcacgtttgcagggctggagggggtc
ataacggcagtgctggatgaattcccacatatatggggaaagcgccgagagctgttcgtc
ttccttctaatctcagtctgcttcctggggtccctttccacactaacatttggtggcgcc
tacatggtgaagctgtttgaggaatatgccaccggtcccgccgtactgacagttgtattt
ctggaggccattgctgtgtcttggttctatggtatcaatcagttctgcagagatgtcaga
gagatgttgggtttcagtccgggatggttctggaagatctgctgggtggccatctgcccc
ctgttcctcctgttcataatttgcagcttcatgtccagccctccggatctacggctcttt
gactaccaatatcccagctggactgtggtgcttggctattgcattgggacatcctcgttc
atctgcgttccagcatacatggtgtacctactcaccagcacgcctggctcaataaaagag
cgctttttgaagagcattaccccagagatctcgacagaaataccccttggtggcatccac
atgaacgctgtttaa
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