Xenopus laevis (African clawed frog): 108713547
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Entry
108713547 CDS
T01010
Symbol
vcam1.L
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108713547 (vcam1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xla04090
]
108713547 (vcam1.L)
04091 Lectins [BR:
xla04091
]
108713547 (vcam1.L)
CD molecules [BR:
xla04090
]
Proteins
108713547 (vcam1.L)
Lectins [BR:
xla04091
]
I-type lectins (Siglecs)
108713547 (vcam1.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Adhes-Ig_like
Ig_6
ICAM_N
C2-set_2
SAG
Motif
Other DBs
NCBI-GeneID:
108713547
NCBI-ProteinID:
XP_041446507
Xenbase:
XB-GENE-6488780
UniProt:
A0A8J1MXJ1
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Position
4L:105426834..105443250
Genome browser
AA seq
802 aa
AA seq
DB search
MEPMTVFVMALFISISQADFHMSLKPPQRVISLQIGETFEFLCEAFDCPNPTFTWASLMD
KTLSGTVNTEGSRSILTMQVSAESEGSYLCKVFCNQHKEEKSFTISVYSFPSEPVLHISS
LVAEVQSNIICTVPLVYPSEMLSLSLLKNKEVVSEYDSSMEIAQDGGFQLRNASLSYAWI
PHVEDEGSVIECEAEMSFVDDEIKPITRSTNVTLSVAYPPPNPNITVQPSKSVQAGKDIS
LYCSAESRPQATVRWVKESGNVENELPSENGHLGLTEVKPQESGKYICYAENEAGRKSAS
VVITVQGVPSEPEISILPATTVIQGQAVTIKCVGHISDINTQVTLWKETLMLSKEGIVHI
ERADPMDTAMYKCKASNQYGEREAMESLTVQFPPKNTRLTITPSELVREGDQVIIQCTSE
AFPTPTLILKEKTEHGEVELETTRGMSVITSATVEHSGTYTCKSINPVGNEVAELSLSVQ
VPPKNTRLTITPSELVREGDQVIIQCTSEAFPTPTLILKEKTEHGEVELETTRGMYIITS
ATVEHSGTYTCKSINPVGNEVAELSLSVQVPPKNTRLTITPSELVREGDQVIIQCTSEAF
PTPTLILKEKTEHGEVELETTRGMYIITSATVEHSGTYTCKSINPVGNEVAELSLSVQVP
PQNTTVLVKPSKNVMEGDTVTITCETHSSPLPTILLKKVCTGTDSTTQREAENGTFTLHN
VTRNDTGTYVISIINEAGNTTEVIQINVQARYQSPQYSFATPIIATSLFAVSAAVIGLIV
YHMKQVRLQGSYSLVNALRSRV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgactgtctttgtgatggcactcttcatttcaatctcccaggctgatttt
cacatgtccctgaaacccccacagagggtgatctctctccagattggggagacatttgaa
ttcttatgtgaagcatttgactgtcccaatcccacttttacttgggctagcctgatggat
aaaacattgagtggcactgtaaacacagaaggcagcaggtctatcctaaccatgcaggtc
agcgctgagagtgaaggcagttacctgtgtaaagtcttctgcaatcaacacaaagaagaa
aaaagtttcacaatcagcgtctactctttcccaagtgaacctgttctacacatctcatct
cttgtggctgaggttcagtccaatatcatctgcacagtccctcttgtgtacccttctgaa
atgctgagtttgagtttactgaagaacaaagaagtggtgtcagaatatgactcatctatg
gagatagctcaagatgggggattccagttaagaaatgctagcctatcatatgcctggata
cctcatgtggaagatgaaggctcggtaattgagtgtgaggcagaaatgtcatttgtggat
gacgaaatcaaaccaataaccagatctacaaatgtgactctcagtgttgcctaccctcct
ccgaatcccaatattactgtccaaccgtccaaaagtgttcaagctggtaaagatatatct
ctgtattgctcggctgaaagtcggccccaggcaactgtgaggtgggtgaaggagtctggg
aatgtggagaatgagttaccatcagaaaatgggcacctgggattaactgaagtaaagcca
caagaatctgggaagtacatctgctatgcagagaatgaagctgggagaaaatctgcctct
gtagtgatcactgtacaaggtgtgccaagtgaacctgagatttccatcctaccagcaact
acagtgattcaggggcaagcagttacaattaaatgtgtggggcatattagtgacattaat
actcaggtgactttgtggaaagaaacccttatgctgagcaaagaggggattgtgcatata
gagagagcagatcccatggatacagcaatgtacaagtgcaaagcatcaaatcaatatgga
gaaagagaggcaatggaatctctgactgtccaatttccacctaaaaacacaagactcacc
attacaccctccgagctggtgagagaaggggatcaagtaattatccaatgtacgtccgaa
gcatttcctacccccacattgatccttaaggaaaagacagaacatggtgaggtggagctg
gaaactacaagagggatgtccgttatcacctctgccacagtggagcattcaggaacatat
acctgcaaatccattaacccagttggaaatgaagtggcagagctcagtctgagtgtgcaa
gttccacctaaaaacacaagactcaccattacaccctccgagctggtgagagaaggggat
caagtaattatccaatgtacgtccgaagcatttcctacccccacattgatccttaaggaa
aagacagaacatggtgaggtggagctggaaactacaagagggatgtacattatcacctct
gccacagtggagcattcaggaacatatacctgcaaatccattaacccagttggaaatgaa
gtggcagagctcagtctgagtgtgcaagttccacctaaaaacacaagactcaccattaca
ccctccgagctggtgagagaaggggatcaagtaattatccaatgtacgtccgaagcattt
cctacccccacattgatccttaaggaaaagacagaacatggtgaggtggagctggaaact
acaagagggatgtacattatcacctctgccacagtggagcattcaggaacatatacctgc
aaatccattaacccagttggaaatgaagtggcagagctcagtctgagtgtgcaagtacct
ccacaaaataccacagttcttgtaaagccatccaaaaatgtaatggaaggtgacaccgtg
accatcacctgtgagacacacagctccccacttccaacaatcctactgaagaaggtgtgc
accggcaccgacagtacaacacagagagaagcagagaacggcaccttcaccttacacaat
gtcacacgcaatgacactggaacctatgtgatcagcataattaatgaagcaggaaacacc
actgaggtcatccagatcaatgtacaagctcgatatcaaagcccccaatatagctttgca
actccaatcatagcaacatccttatttgcggtatcagcagctgtcatcggactgattgtt
tatcatatgaaacaagtacggctacaggggtcatacagcttagtgaacgctttgagaagc
agagtttga
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