Xenopus laevis (African clawed frog): 108717331
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Entry
108717331 CDS
T01010
Symbol
prdm6.L
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108717331 (prdm6.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108717331 (prdm6.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
108717331 (prdm6.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
108717331 (prdm6.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108717331 (prdm6.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108717331 (prdm6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
108717331
NCBI-ProteinID:
XP_041424155
Xenbase:
XB-GENE-6488567
UniProt:
A0A1L8I1F7
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All DBs
Position
1L:complement(183872267..183955411)
Genome browser
AA seq
541 aa
AA seq
DB search
MLKPGETAGSAFLKVDPMYLQHWHQLFPQTHVKTGVVSHVALPERSEPPIETLRLRPASL
SSASSSNSSTPSSLAGVIPIPAVLGVLQSSEIVAPQRSEMGISKCIGETPERFQCSPEEL
DYYLYGQQRMEIIPISTPTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTAAVAP
PPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGLIVSPEKVQNGAVR
NTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYVRCARHCGEQNLTVVQYRSNIFYRACID
IPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSPVVEAMSRQDTLPSFNKNGKLSTS
LQRSLVFPQTPCNRNYSLLEKSGPLDTGFNQISVKNQRVLASPTSTSQLNSEFSDWHLWK
CGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYC
GRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPITENTESIEV
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagagactgctggatccgcgttcctgaaggttgacccgatgtatctg
cagcactggcaccagctcttcccccagactcacgtcaagactggagttgtgagccatgtg
gcccttcctgagcgatctgagccccccatagagactctccgcctgcgcccggcatccctc
tcctcggcctcttcctctaactcttccaccccctcctctctggccggagtcatccccata
cccgcagttctcggggtcttacaaagctctgagatcgtggccccccaaagaagtgagatg
ggaatttccaagtgcataggggagacccctgagagattccagtgctccccggaggaactg
gactattacctgtatgggcagcaacgcatggagatcattccgatcagcaccccgaccagc
gaccccaacaaccgttgcgacatgtgtgcagataatcgtaatggagaatgtcctatgcat
ggtccattacattctctacgtcgcctagtaggcaccagcagcactgcagcagtggctcct
ccacctgaaattcctgaatggttgcgagacctgccacgtgaggtgtgcctgtgtaccagt
actgttcccggtctggcatacggcatttgtgcagctcagagaatccaacaaggaacatgg
attggacctttccagggactcattgtgtctccagaaaaagtgcagaatggggctgtacga
aacacacagcatctctgggaaatatatgaccaagatgggactctacagcattttattgat
ggaggagagcctagtaagtcaagctggatgaggtatgtccgatgcgctagacactgcggg
gaacagaatttgacagtagttcagtacagatctaatatattttatagagcttgtatcgac
atccccagaggcacagaactgttggtgtggtacaatgacagctacacatcattctttggg
attccattgcagtgcattgctcaggatgaaaacttgaatgttccatcaccagtagttgaa
gctatgtcacggcaagacacattaccatcttttaacaaaaatggcaagttaagcacctcg
ttgcaaaggtccctagttttcccacagactccctgcaatagaaattactctttactggaa
aaatcggggcctctggacacaggatttaaccagatcagtgtaaaaaaccaacgagtgctt
gccagtcctacctcaacgagccagttgaactcagaattcagtgactggcatctttggaaa
tgtggacaatgttttaagacttttacccaacgaattcttctacagatgcatgtgtgcacc
cagaacccagacaggccttaccagtgtggacattgctctcagtccttctcccagccttca
gaattaaggaatcacgtcgtcacccactccagcgatagacccttcaagtgcggctattgt
ggcagagcctttgctggggcaactacattaaacaatcacatccggacgcacacaggggaa
aagccatttaagtgcgagaggtgcgataggagcttcacacaggccacccagctgagtcga
catcagaggatgcccaacgagtgcaagccgataacagagaacacagaatcaattgaagtg
gattaa
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integrated database retrieval system
