Xenopus laevis (African clawed frog): 397944
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Entry
397944 CDS
T01010
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04260
Cardiac muscle contraction
xla04261
Adrenergic signaling in cardiomyocytes
xla04814
Motor proteins
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
397944
04820 Cytoskeleton in muscle cells
397944
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
397944
04261 Adrenergic signaling in cardiomyocytes
397944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
397944
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
397944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
CENP-F_leu_zip
Lebercilin
DUF745
ATG16
DUF3450
DUF1664
Laminin_I
SlyX
Fez1
XhlA
DUF16
Motif
Other DBs
NCBI-GeneID:
397944
NCBI-ProteinID:
XP_018109603
UniProt:
A0A8J0UU62
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Position
3S:61350837..61382543
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEDKSKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctcaaactggacaaggaaaacgccttggac
agagcagaacaggctgaagcagacaagaaaggagcagaggacaagagcaaacagctggag
gatgaacttgtagcattgcagaagaaactaaaaggtactgaggatgagctggacaaatac
tctgaagccctgaaagatgcccaggagaagctagaacttgccgagaagaaagccactgat
gctgaaggagatgtagcctcattaaacaggcgcatccagctggtagaggaggagttggat
cgtgctcaagagcgtctggccacagctcttcagaaactggaggaggctgagaaggctgca
gatgagagtgagagaggtatgaaggtcattgaaaacagagccctgaaggatgaagagaag
atggagttgcaagaaatccaactgaaagaggccaagcacattgctgaggaggctgaccgc
aaatatgaagaggttgctcgtaagctggtgatcattgagggtgatctggaacgtgcagag
gaacgtgctgaactttcagaaagcaaatgtgccgagcttgaggaggaattgaaaactgtt
accaacaacctgaaatctctggaggcccaggcagagaagtactcccagaaggaggacaaa
tatgaagaggaaattaaggttcttacagataaactgaaggaggctgaaacacgtgccgag
tttgcagagaggacagtagccaaattggaaaagagcattgatgatttagaagatgagctg
tatgctcagaaactgaagtacaaagccatcagtgaagaactggatcacgctctcaatgac
atgacttcaatataa
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