KEGG   Xenopus laevis (African clawed frog): 397944
Entry
397944            CDS       T01010                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K09290  tropomyosin 3
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04260  Cardiac muscle contraction
xla04261  Adrenergic signaling in cardiomyocytes
xla04814  Motor proteins
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    397944
   04820 Cytoskeleton in muscle cells
    397944
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    397944
   04261 Adrenergic signaling in cardiomyocytes
    397944
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    397944
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     397944
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II Crescentin TMF_DNA_bd CENP-F_leu_zip Lebercilin DUF745 ATG16 DUF3450 DUF1664 Laminin_I SlyX Fez1 XhlA DUF16
Other DBs
NCBI-GeneID: 397944
NCBI-ProteinID: XP_018109603
UniProt: A0A8J0UU62
LinkDB
Position
3S:61350837..61382543
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEDKSKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctcaaactggacaaggaaaacgccttggac
agagcagaacaggctgaagcagacaagaaaggagcagaggacaagagcaaacagctggag
gatgaacttgtagcattgcagaagaaactaaaaggtactgaggatgagctggacaaatac
tctgaagccctgaaagatgcccaggagaagctagaacttgccgagaagaaagccactgat
gctgaaggagatgtagcctcattaaacaggcgcatccagctggtagaggaggagttggat
cgtgctcaagagcgtctggccacagctcttcagaaactggaggaggctgagaaggctgca
gatgagagtgagagaggtatgaaggtcattgaaaacagagccctgaaggatgaagagaag
atggagttgcaagaaatccaactgaaagaggccaagcacattgctgaggaggctgaccgc
aaatatgaagaggttgctcgtaagctggtgatcattgagggtgatctggaacgtgcagag
gaacgtgctgaactttcagaaagcaaatgtgccgagcttgaggaggaattgaaaactgtt
accaacaacctgaaatctctggaggcccaggcagagaagtactcccagaaggaggacaaa
tatgaagaggaaattaaggttcttacagataaactgaaggaggctgaaacacgtgccgag
tttgcagagaggacagtagccaaattggaaaagagcattgatgatttagaagatgagctg
tatgctcagaaactgaagtacaaagccatcagtgaagaactggatcacgctctcaatgac
atgacttcaatataa

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