Xenopus laevis (African clawed frog): 397953
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Entry
397953 CDS
T01010
Symbol
grin1.L, GluN1, grin1, NMD-R1, nmda1, nmdar1, NR1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform 1 precursor
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04020
Calcium signaling pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
397953 (grin1.L)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
397953 (grin1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
397953 (grin1.L)
Ion channels [BR:
xla04040
]
Ligand-gated channels
Glutamate (ionotropic)
397953 (grin1.L)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
397953
NCBI-ProteinID:
NP_001081615
Xenbase:
XB-GENE-866327
UniProt:
A0A1L8F5J9
Structure
PDB
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All DBs
Position
8L:complement(990061..1014724)
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AA seq
904 aa
AA seq
DB search
MGTMRLFLLAVLFLFSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHFTRKIQL
NATSVTHRPNAIQMALSVCEDLISSQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKL
ETLLEGKESKSKKRNYENLDQLSYDNKRGPKADKVLQFEPGTKNLTALLLEAKELEARVI
ILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGSALRYAPDGIIGLQLINGKNESA
HISDAVAVVAQAIHELFEMENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGVTGRIE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSYIIQNDRKIIWPGGETERPQGYQMSTRLK
IVTIHQEPFVYVRPTTSDGTCREEYTINGDPIKKVICNGPNETIPGRPTVPQCCYGFCVD
LLIKLAREMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLNILKSHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYPPTDITGQLNLSDPSV
STVV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggcactatgcgccttttccttttggctgtactcttcttgttctcctttgcccgtgct
ggatgtgaccccaaaattgtgaacattggggcagtgctgagcaccaagaagcatgagcaa
atctttcgggaagctgtaaaccaggcaaataaacgccattttaccaggaagatccaactc
aatgccacctcggtaacccatcgacccaatgccatccagatggctctatctgtgtgtgag
gacctcatctccagccaggtctacgccatattggttagtcaccctcctgcccccacggat
cacctgacgccaacgcctatatcctacaccgcaggtttttaccggattccagtcattggg
ctgaccactcgcatgtctatctattctgataagagcatccacctctcgttcctacgcacg
gtgcccccgtactcccaccaggccttggtttggtttgaaatgatgcggctgttcaactgg
aaccatgtcattctcattgttagtgatgatcacgagggccgggccgctcagaagaagctg
gagaccctgttagaggggaaagagtccaagagtaaaaaaaggaactatgagaacctcgac
caactttcctatgacaacaagcgtggacccaaggcagacaaagtcctgcagtttgaacct
ggaaccaaaaatttgactgcccttctccttgaggccaaggaactggaagccagagttatc
atcctctctgccagtgaggatgatgccacagcggtgtacaaatcagcagcaatgctggac
atgactggtgctggctatgtctggttggtgggagagagggaaatatctggaagcgccttg
agatatgcgcctgatggaattattggactccagctcatcaatggaaagaatgaatcggcg
catataagtgacgcagtggctgtggtggctcaggcaatacacgaattgtttgaaatggaa
aatattactgaccctccgaggggctgtgttggaaacactaatatatggaagaccggacct
ctgttcaaaagggttctcatgtcttcaaaataccccgatggggtaacaggaagaattgag
ttcaatgaggacggagacaggaaatttgccaattacagtataatgaacctgcagaaccgc
aagttagtccaggttggaatcttcaatggcagctatattatacagaatgacagaaagatc
atttggcccggcggggagaccgagagaccacaaggctatcaaatgtccaccaggctgaag
atagttaccatccaccaagaaccttttgtatatgtgaggccaacaacatctgacggaaca
tgcagggaagaatacaccatcaatggtgatcccatcaaaaaagttatttgtaatggtccc
aatgagaccatcccaggtcgcccaactgtaccacagtgctgttatggcttttgtgtcgac
ctgctaattaaacttgccagagagatgaatttcacctatgaggttcacttggtagccgat
ggtaaatttggcactcaggagcgggtcaataacagcaataaaaaggagtggaacggcatg
atgggagagttactgagcggccaagcagacatgatcgtcgcaccactcactattaataat
gaacgtgctcagtacatcgagttttccaagccattcaagtatcaaggactcactatactt
gtgaaaaaggaaatcccgaggagcactctggactcattcatgcagccgtttcagagcact
ctctggcttctggttggactctcagtgcatgtggtggcggtgatgttatatctactggat
cgattcagtccgtttggacgtttcaaagtaaacagcgaagaggaagaggaagatgctttg
acactatcttcagccatgtggttttcctggggggtcctcttgaactctggtattggagaa
ggggctcccaggagtttttctgcccgaatccttggcatggtctgggctggattcgctatg
attattgtagcctcctatactgctaacctggctgccttcctggtcttggacaggccagag
gaaaggataactggcattaatgatccccggctgcgcaatcccagtgacaagtttatttac
gccactgtcaagcaaagctctgtggacatttatttccggagacaagtagaactcagcact
atgtacagacacatggaaaagcacaactatgagagtgcggcggaagccatacaagccgtg
cgcgataacaaactgcatgcttttatatgggactcggctgtgctggagtttgaggcctct
cagaagtgtgaccttgttaccaccggtgaattgttcttccgctctggcttcggcatcggc
atgagaaaagacagcccctggaaacagaatgtctcactaaacatcctcaagtcgcatgag
aacggcttcatggaagagctggataagacctgggtcaggtaccaggagtgtgactcccgc
agcaatgccccagccacattgacatttgagaacatggcaggggtcttcatgctggtcgct
gggggtattgttgccggaatcttcttgatatttattgaaatcgcctacaagcggcacaag
gatgcccgtaggaagcagatgcagttggcctttgctgccgtcaacgtgtggagaaaaaac
ctgcagcaatacccaccaaccgatatcacggggcaactaaatctgtccgacccttctgtt
agcactgtggtctaa
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