Xenopus laevis (African clawed frog): 398711
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Entry
398711 CDS
T01010
Symbol
setdb2.S, clld8, setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
398711 (setdb2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398711 (setdb2.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
398711 (setdb2.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
398711 (setdb2.S)
Heterochromatin formation proteins
Other heterochromatin formation proteins
398711 (setdb2.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
398711
NCBI-ProteinID:
NP_001082765
Xenbase:
XB-GENE-1219036
UniProt:
Q6YI93
LinkDB
All DBs
Position
2S:140860961..>140887510
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AA seq
699 aa
AA seq
DB search
MEQSANARQSTLRSRTQELNTLSVLSKDVSLEDAKKYWKDRQADGKVDWIFEKVLNKLKI
LWQKIKDGSATNLEYVRAVILVNEAGNLEEDLEEDLQEDTDTIHIDIHKENEVQENTDCS
PERKEDTCLNLNTDCGTDVSGSEPECNSTVSPPAAERVYFGNHSCGPSCLSGINPFLFTK
GNPLQLPISCDFQRCHLKINSPDDLSHILYKAPCGRSLRDYDEVHSYLTETGCHFLAVDN
FSFNNHVRLDSNSSFNQGIVQDCDISNDVESVPVAFSNEIDNTRPSNFIYRKTSWPPGYS
LNNFTDIFVKCCNCTDGCLDILTCSCLQLTAQAFTKCMESSLGIGPLGYKHKRLQEPIPT
GLYECNVSCKCDRMLCQNRVVQHGLKLRLQVFKTNTKGWGVRCLDDVDKGTFVCIYAGRI
LIRTADCTVKSTPDDSVACGNEDHEDSTSTCALILSKRKRKTSHSDSEVTVMHTNPYSMR
SHGLSVHRLSNTFSPRQARSGEREFSLQPLRRPKTKTSMLQKRRRQLIEEGACTVQNSSE
EEGPTPPQSPEQKSSAGTKIQRNENSDETASGYVSEESSSSVISGGHPLEKPISKFKSKL
NKTTVYLSTSPEQTCEENLHFLDASKEGNVGRFLNHSCCPNLFVQQVFVDTHQKCFPWVA
FFTNSVVKAGTELTWDYSYDIGTAADQEIQCLCGQKHAK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagtgccaatgctcggcagtcaaccctacgttcccgaacacaagaattaaat
acactatctgttttgtccaaagatgtatcgctcgaagatgcaaagaaatattggaaagat
cgtcaagcggatgggaaagtagactggatatttgagaaagtattgaacaagctcaagatt
ctttggcagaaaatcaaagatgggtcagcaacaaacttagaatatgtaagagctgtgatt
ttggtgaatgaagcaggaaatttagaagaggacttggaagaggacttacaagaggacact
gataccatacacattgatattcacaaggaaaatgaagtgcaggaaaacacagattgttct
ccagaaagaaaggaggacacatgtcttaacctaaatactgattgtgggacagatgtttca
ggttctgagcctgagtgcaacagcacagtttcgcctcctgctgcagagagggtctatttt
ggaaaccattcatgtggcccatcttgtctctctggcattaatccatttctatttacaaaa
ggaaaccctctacaactcccaatctcctgtgactttcagaggtgccatctaaagataaat
agccctgatgacctgtcacatatcctatataaagctccatgtggcagaagcctgagagac
tatgatgaagtgcattcttacctcactgaaactgggtgccactttttagctgtggacaac
ttttctttcaataatcatgttcggttggacagcaattcatctttcaaccaaggaattgtt
caggactgtgatataagcaacgatgtggagtcagtgccagttgcattctccaatgaaatc
gataacacaagaccatctaatttcatctacagaaagacctcttggccaccaggatactcc
ttaaataatttcacagacatctttgtaaaatgctgcaattgcactgatggctgcttagac
atcttaacttgttcatgcctgcaactcacagcacaagcattcacgaaatgtatggaatcg
tccctcggtatcggtcccctaggctataaacacaaaagacttcaagaacctatccctact
ggattatatgaatgtaacgtgtcctgcaagtgtgatcggatgctgtgccagaatcgagtt
gtgcagcacggccttaaactgagactgcaggtcttcaaaacaaatactaagggctggggt
gtccgctgtctggatgatgtagacaaagggacatttgtttgcatctatgcaggaagaata
ctaatcaggacagcagattgtactgtgaaaagcacaccagatgattctgtggcatgtggt
aatgaagatcatgaagatagcacaagtacttgtgctctaatattaagcaaacggaagaga
aagacgtcccattcagactctgaagtcacagttatgcatacaaacccctacagcatgcgc
agccatggattatctgtccatagactatcaaacacattcagtccaagacaggctagatct
ggtgaaagagaattctctttgcagccacttagaagacccaaaacaaagacctccatgctc
caaaagcgtagaaggcagctcattgaagagggagcgtgcacagttcagaacagttcggaa
gaggagggtccaacacctccacaatcgcctgagcagaaatccagtgcaggaaccaaaata
caaagaaatgaaaattctgatgagactgcttcagggtatgtgtcagaggagagcagtagt
tcagttatttctgggggacatcctttagaaaaacccatatccaagtttaagtcaaagcta
aacaaaacgaccgtgtatctatctacctctccggaacagacttgtgaagaaaacttgcat
ttcttagatgcatcgaaagaagggaatgttggacggtttctaaatcacagctgctgtccc
aatctatttgtgcagcaagtatttgtggatacacaccagaaatgttttccgtgggtggca
ttttttactaacagtgtagtaaaagctggaacagaactaacctgggactatagctatgat
attgggactgctgctgatcaggaaatccaatgcctgtgtggtcaaaaacatgcaaaataa
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