Xenopus laevis (African clawed frog): 398872
Help
Entry
398872 CDS
T01010
Symbol
mdh1.S, brso01, mdh-s, mdh1, mdha, mor2
Name
(RefSeq) malate dehydrogenase 1 S homeolog, cytoplasmic isoform mdh1
KO
K00025
malate dehydrogenase [EC:
1.1.1.37
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00020
Citrate cycle (TCA cycle)
xla00270
Cysteine and methionine metabolism
xla00620
Pyruvate metabolism
xla00630
Glyoxylate and dicarboxylate metabolism
xla01100
Metabolic pathways
xla01200
Carbon metabolism
Module
xla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
398872 (mdh1.S)
00620 Pyruvate metabolism
398872 (mdh1.S)
00630 Glyoxylate and dicarboxylate metabolism
398872 (mdh1.S)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
398872 (mdh1.S)
Enzymes [BR:
xla01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
398872 (mdh1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
398872
NCBI-ProteinID:
NP_001083335
Xenbase:
XB-GENE-865511
UniProt:
Q6PAB3
A0A974CS66
LinkDB
All DBs
Position
5S:1452001..1466879
Genome browser
AA seq
334 aa
AA seq
DB search
MPEPVKVLVTGAAGQIAYSLLFGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDC
ALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYS
KKSVKVIVVGNPANTNCLTALKSAPSIPKENFSCLTRLDHNRAKAQIALKLNVASDDVKN
VIIWGNHSSTQYPDASHASVTLQGKDVGAFEAVKNDDWLKGGFITTVQQRGAAVIKARKL
SSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIV
EGLCINDFSREKMDITAKELQDEKETAFEFLSSE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccgtgaaagtccttgtgaccggagctgctggtcagattgcttactccttg
ctctttggtattgctaaaggagatgtctttggaaaagaccagccacttatacttgttctt
ttggatattacccctatgatgactgtacttgaaggtgtggtgatggagctgcaggactgt
gctttgcccctgctgaaagaggtaattgctaccgataaggaagacgtggccttcaaggat
ttggacgttgccattctggttggttctatgccaaggagggagggcatggaaagaaaagac
ttgctgaaagccaatgtgaagatctttaaatctcagggtgcagctctgaacaagtattcc
aagaagagcgttaaggttattgttgtggggaatccagcaaatacaaactgcctgactgca
ctgaagtctgctccatctatccctaaagagaacttcagctgtctgacacgtttagatcac
aaccgagcaaaagcacaaattgctctgaagttgaatgttgcatctgatgatgtaaagaac
gtaattatttggggtaatcactcatcaactcagtatcctgatgcttctcatgcgtctgta
actcttcaaggaaaagacgttggggcctttgaagcagtgaagaatgacgactggctaaag
ggtggatttatcactactgtgcagcaaagaggagcagctgttattaaggccagaaagttg
tccagtgcaatgtctgctgctaaagccatctgtgatcatgtgagggatatctggtttgga
accccagaggggcagtttgtttccatgggggtcatttcggatggaaactcttatggtgtg
cctgaagacctgatgtattcattccctcttaccatcaagaataagacctggaaaatagtg
gaaggcctgtgtatcaatgacttttcccgggagaaaatggatatcaccgctaaagaactt
caggatgaaaaagaaactgcatttgaatttctgtccagcgaatga
DBGET
integrated database retrieval system
