Xenopus laevis (African clawed frog): 399420
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Entry
399420 CDS
T01010
Symbol
tpm3.L
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04260
Cardiac muscle contraction
xla04261
Adrenergic signaling in cardiomyocytes
xla04814
Motor proteins
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
399420 (tpm3.L)
04820 Cytoskeleton in muscle cells
399420 (tpm3.L)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
399420 (tpm3.L)
04261 Adrenergic signaling in cardiomyocytes
399420 (tpm3.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
399420 (tpm3.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
399420 (tpm3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
DUF3450
TMF_DNA_bd
SlyX
HR1
DUF745
BORCS7
SNARE
CALCOCO1
FPP
CENP-F_leu_zip
ATG16
DUF16
ERM_helical
Lebercilin
NPV_P10
Crescentin
FlxA
DUF1664
Motif
Other DBs
NCBI-GeneID:
399420
NCBI-ProteinID:
XP_018087044
Xenbase:
XB-GENE-6253902
UniProt:
A0A8J0TLS1
LinkDB
All DBs
Position
8L:132776114..132801116
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AA seq
271 aa
AA seq
DB search
MSGGGMSSIEAVKRKIQVLQQQADEAEEKSERLSRDLEGEKRSRETAEAEVASLNRRIQL
VEEELDRAQERLSTALQKLEEAEKTADESERGMKVIENRALKDEEKMELQEIQLKEAKHI
AEEADRKYEEVARKLVIIEGDLERTEERAELSESRCRDLEEQIRQLDHSLKCLNATEEKY
SKKEDKYEEEIKILSDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEEL
DHALNDMTSIVNCDFGGVDRRSQTRLQWKEI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggagggatgagcagtatcgaggcggtgaaacggaagatccaggtgctacag
caacaggcagatgaggcggaggagaaatcggagcggctcagccgggatttagagggagag
aagcgatcccgggagacggctgaagctgaggttgcctctctgaaccgacgtatccagtta
gtggaggaggaactggaccgggcccaggagcgtctctctactgcactacagaagctggag
gaggcggagaagacagccgatgaaagcgagagggggatgaaggtgatcgaaaacagagcc
ctgaaagatgaggagaagatggagctgcaggaaatccaactgaaagaagccaaacacata
gcagaagaagcagaccggaaatatgaggaggttgcccggaagctggtcattatcgagggg
gacctcgaacgtacagaagagagggcagaactgtctgagtcccgatgccgagacctggag
gagcagatccgccagttggaccacagcctcaagtgtttgaatgccacagaggaaaagtat
tccaaaaaagaagataaatatgaggaggaaataaagattctgtcagataagctaaaagag
gctgagaccagagcggagtttgctgagcggtccgtggccaaacttgagaagaccattgat
gacttggaagacgagctgtatgcgcagaaactcaagtacaaagctatcagcgaggagctc
gaccacgccctcaatgatatgacgtccattgtaaactgtgactttggaggggttgatagg
agatcccagacccgcttacaatggaaagagatctag
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