Xenopus laevis (African clawed frog): 399455
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Entry
399455 CDS
T01010
Symbol
apc.L, apc, xapc
Name
(RefSeq) adenomatous polyposis coli homolog
KO
K02085
adenomatosis polyposis coli protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04310
Wnt signaling pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
399455 (apc.L)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
399455 (apc.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
399455 (apc.L)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
399455 (apc.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
399455 (apc.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
399455 (apc.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
399455 (apc.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
399455 (apc.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_rep
APC_u9
APC_u14
APC_u15
APC_N_CC
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
Sec7-like_HUS
bZIP_1
HALZ
Motif
Other DBs
NCBI-GeneID:
399455
NCBI-ProteinID:
NP_001084351
Xenbase:
XB-GENE-480859
UniProt:
P70039
LinkDB
All DBs
Position
1L:complement(187818668..187900910)
Genome browser
AA seq
2829 aa
AA seq
DB search
MAAASYDQLVKQVEALTMENTNLRQELEDNSNHLTKLETEATNMKEVLKQLQGSIEDEAM
ASSGPIDLLERFKDLNLDSSNIPAGKARPKMSMRSYGSREGSLSGHSGECSPVPVGSFQR
RGLLNGSRESAGYMEELEKERLLLIAEHEKEEKEKRWYYAQLQNLTKRIDSLPLTENFSM
QTDMTRRQLEYEARQIRAAMEEQLGTCQDMEKRVQTRVGKIHQIEEEILRIRQLLQSQVA
EAAERTPQSKHDAGSRDAEKLPDGQGTSEITASGNVGSGQGSSSRADHDTTSVMSSNSTY
SVPRRLTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQ
LLHGNDKDSVLLGNSRGSKEARASGSAALDNIIHSQPDDKRGRREIRVLHLLEQIRAYCE
TCWEWQEAHEQGMDQDKNPMPAPVDHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAEL
LQVDCEMYGLINDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKSCMRALVAQLKSESE
DLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALDVKKESTLKSVLSALWNLSAH
CTENKADICSVDGALAFLVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE
NNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQEGLWDMGAVSMLKNLIHSKHKMI
AMGSAAALRNLMANRPAKYKDANIMSPGSSVPSLHVRKQKALEAELDAQHLSETFDNIDN
LSPKTTHRNKQRHKQNLCSEYALDSSRHDDSICRSDNFSIGNLTVLSPYINTTVLPGSSS
PRPTMDGSRPEKDRERTAGLGNYHSTTESSGNSSKRIGIQLSTTAQISKVMDEVSNIHLV
QENRSSGSASEMHCMSDERNSQRKPSSNHPQSNPFTFTKAESSTRGCPVAFMKMEYKMAS
NDSLNSVSSTEGYGKRGQVKPSVESYSEDDESKFFSYGQYPAGLAHKIQSANHMDDNDTE
LDTPINYSLKYSDEQLNSGRQSPTQNERWSRPKHIIDSEMKQSEQRQPRTTKTTYSSYTE
NKEEKHKKFPPHFNQSENVPAYTRSRGANNQVDQSRVSSNLSNNSKASKPHCQVDDYDDD
KTTNFSERYSEEEQQEDETERQNKYNIKAYASEEHHGEQPIDYSRKYSTDVPSSAQKPSF
PYSNNSSKQKPKKEQVSSNSNTPTPSPNSNRQNQLHPNSAQSRPGLNRPKQIPNKPPSIN
QETIQTYCVEDTPICFSRGSSLSSLSSAEDEIEGRERNSRGQESNNTLQITEPKEISAVS
KDGAVNETRSSVHHTRTKNNRLQTSNISPSDSSRHKSVEFSSGAKSPSKSGAQTPKSPPE
HYVQETPLMFSRCTSGSSLDSFESHSIASSIASSVASEHMISGIISPSDLPDSPGQTMPP
SRSKTPPPPQTVQAKKDGSKPIVPDEERGKVAKTAVHSAIQRVQVLQEADTLLHFATEST
PDGFSCASSLSALSLDEPYIQKDVQLKIMPPVLENDQGNKAEPEKEFIDNKAKKEDKRSE
QEKDMLDDTDDDIDILEECIISAMPRKPSRKNKKVPQPTPGKPPPPVARKPSQLPVYKLL
SSQNRLQTQKHVNFTHSDDMPRVYCVEGTPINFSTATSLSDLTIESPPSEPTNDQPNTDS
LSTDLEKRDTIPTEGRSTDDTDASKPLNPTTVLDEDKAEEGDILAECIHSAMPKGKSHKP
YRVKKIMDQINHTSAATSSGNSRSMQETDKNKPTSPVKPMPQSIGFKERLKKNTELKLNP
NSENQYCDPRKPSSKKPSKVANEKIPNNEERTKGFAFDSPHHYTPIEGTPYCFSRNDSLS
SLDFEDDDIDLSKEKAELRKEKGTKDTDQKVKYKHENRAINPMGKQDQTGPKSLGGRDQP
KALVQKPTSFSSAAKGTQDRGGATDEKMENFAIENTPVCFSRNSSLSSLSDIDQENNNKE
TEPLKQTGTSETQLGLRRPQTSGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECI
SSAMPKKRKPSKIKNEVGKSRSNSVGGILAEEPDLTLDLRDIQSPDSENAFSPDSENFDW
KAIQEGANSIVSRLHQAAAAGSLSRQGSSDSDSILSLKSGISLGSPFHLTLDKEEKTITS
NKGPKILKPAEKSALENKKTEEEPKGIKGGKKVYKSLITGKSRSSSDFSSHCKQSVQTNM
PSISRGRTMIHIPGVRASSPSTSPVSKKGPVFKNVPSKGSNENPSSSSSPKGTKPLKSEL
VYGSRPSSTPGGSSKGNSRSGSRDSASSRPSPQPLSRPLQSPGRNSISPGKNGISPPNKF
SQLPRTTSPSTASTKSSGSGRMSYTSPGRQLSQPNLSKQSGLPKTHSSIPRSESASKSLN
QNVNTGSNKKVELSRMSSTKSSGSESDRSERPALVRQSTFIKEAPSPTLRRKLEESASFE
SLSSSSRADSPPRSQTQTPALSPSLPDMALSTHSIQAGGWRKMPPNLNPAAEHGDSRRRH
DISRSHSESPSRLPITRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESSEKAKS
EDEKQQVCSFPGPRSECSSSAKGTWRKIKESEILETPSNGSSSTIAESNCSLESKTLVYQ
MAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNSPPVIDNVLDQGQKEEAAKDCHTRHNSG
NGNVPLLENRQKSFIKVDGLDTKGTDPKSLINNQQETNENTVAERTAFSSSSSSKHSSPS
GTVAARVTPFNYNPSPRKSNGENSTSRPSQIPTPVTNSTKKRDSKTETTDSSGSQSPKRH
SGSYLVTSV
NT seq
8490 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcttcgtatgatcagttggtaaagcaagtggaggcgttgacgatggagaat
acaaaccttcgacaagaattagaagacaattccaatcatcttacaaaacttgagactgag
gcaacaaacatgaaggaggttctcaagcagctgcaaggaagtattgaggatgaggcaatg
gcttcttctggcccaattgatcttctggaacgttttaaagacctaaatctggacagcagt
aatatccctgcaggcaaggctaggccaaagatgtctatgcgttcttatggaagcagagaa
ggctctctttctggtcattcaggtgaatgcagtccggtacctgtgggttcatttcaaagg
agaggccttttaaatggaagcagagaaagtgctgggtatatggaagaacttgagaaggaa
aggttattacttattgctgagcacgaaaaggaagaaaaagaaaagcgctggtactatgcc
caacttcagaaccttaccaagaggatcgatagccttcctcttacagaaaatttttccatg
cagactgatatgaccagaagacaactggagtatgaggcccggcaaatcagagctgcaatg
gaggagcagttgggaacatgtcaagacatggagaagcgagtacagacaagagtgggtaaa
atacatcaaatagaggaagagatattacgtattcgacaactgttgcagtctcaggtggca
gaggcagcagagcggactccacagagcaagcatgatgcaggcagcagggatgctgagaag
ctgcccgatggacagggaacctctgaaatcacggcatctggcaatgttggaagcggacag
ggttcatccagtagagcagatcacgacacaaccagtgttatgagctctaacagcacttac
tctgttccgcgaaggcttacaagtcatcttggtacaaaggttgaaatggtatattcactt
ctatcaatgcttggcactcacgacaaggatgatatgtctcggactctgttagccatgtca
agttctcaagacagctgtattgctatgcgccagtctggatgccttcctcttctcattcag
ttattgcatggcaacgataaagactctgtgctgctgggaaactcgcgtggaagcaaagag
gcccgtgctagcggtagtgcagcactcgataacatcattcactctcagcctgacgacaag
cgaggcagaagggaaatccgagtccttcaccttttggagcagatccgggcttactgcgaa
acatgttgggaatggcaagaagcacacgagcaaggaatggaccaggataagaatccaatg
cctgccccagttgaccaccagatatgtcctgctgtttgtgtgctgatgaaattatcattt
gatgaagaacacaggcatgcgatgaatgaacttggtggactgcaggctattgctgagctt
ttgcaagtagattgtgaaatgtatggacttattaatgaccactatagtgttacattacgg
cgatatgctgggatggcattgacaaatctcacttttggtgatgtagctaacaaggctaca
ctatgctcaatgaaaagttgcatgcgagctcttgtagctcagcttaaatctgaaagtgaa
gatttgcaacaggttattgcaagtgttttaaggaatttatcctggagagcagatgtgaac
agcaaaaaaacccttcgagaggtgggaagtgtgaaggctctaatggaatgtgctctggat
gtaaagaaggagtccactctgaaaagtgtgctaagtgccttgtggaatttgtcagctcac
tgcacagagaataaagcagatatctgctctgtagatggggcgttggcatttctagttagc
acattaacttaccgaagtcaaaccaatactctggccatcattgagagtggaggtggaata
ctacgtaatgtgtccagtttgattgctactaatgaagaccacagacaaatcctaagggag
aacaactgtttgcagaccttactacagcacttgaaatcacacagcttgactattgtaagc
aatgcctgtgggaccctgtggaatttatcagcacgaaatgcgaaagaccaggagggcctc
tgggacatgggggcagtcagcatgctcaaaaaccttatccactcaaagcacaagatgata
gctatgggcagtgctgcagctttaagaaacttaatggcaaacagaccggcaaaatacaag
gatgccaatattatgtcccctggctcaagtgtgccatctcttcatgttcggaaacagaaa
gcattggaagcggaactagatgcacaacatttgtctgagacatttgacaatattgataat
ttaagccccaaaaccacccaccgcaataaacaaaggcataagcagaacttgtgcagcgag
tatgctttggattctagcaggcatgatgattcgatatgccgctcagacaattttagtatt
ggtaatttgactgttctttctccatatattaatacaactgtgctaccagggtcatcttca
cctcgaccaactatggatggtagcaggcctgaaaaagacagggaaagaacagcaggtctc
ggcaactaccattcgacaactgaaagttctggaaattcttccaagcgtattggcatacag
ttgtcaactacagctcagatttctaaagttatggatgaggtatcaaatattcacttggtc
caggaaaacagaagttcagggtctgcttctgaaatgcactgcatgtcagatgaaagaaat
tcacaaaggaaaccttccagcaatcacccccaatcaaatccattcactttcactaaagca
gagagttccacgaggggttgtcctgtagcatttatgaaaatggaatacaaaatggcatca
aatgatagtttaaacagtgtcagcagcacagaagggtatgggaaacgtggccaagtaaaa
ccatctgtagagtcttactctgaggatgatgaaagtaaattttttagttatgggcagtat
cctgcaggcctagcacacaaaattcagagtgcaaaccacatggatgataatgatacagaa
ctagatacaccaataaattatagtctgaaatattcagatgagcagttgaattctggtaga
caaagcccaacacagaatgagagatggtccagaccaaagcacataatagacagtgaaatg
aaacaaagtgaacaaaggcaacctcgaaccaccaaaacaacatatagttcatatactgaa
aataaagaagaaaagcataaaaaattccctccccattttaaccaatcagaaaatgtacct
gcttacaccagatcaaggggggcgaacaaccaagtagaccagtctagagtgagctctaat
ctttctaacaattcaaaagcttccaaacctcattgtcaagttgatgactatgatgacgac
aaaacaacaaattttagtgaacgctattctgaggaggaacaacaggaagatgaaactgaa
agacaaaacaagtacaatattaaggcttatgcttcagaagaacaccatggggaacagcca
attgattacagccgaaagtattctacagatgttccttcatcagcacagaaaccatccttc
ccatattcaaataattcctcaaagcaaaaacccaaaaaagagcaagtttcatctaacagc
aacactccaactccatcaccaaactccaacagacaaaatcagcttcatcctaactctgct
caatccagacctgggctaaatagaccaaaacaaattcctaacaagcctccttctattaac
caagagactattcaaacatattgtgttgaagatacgcccatatgtttttcacgaggcagt
tctttatcttcgctctcctctgctgaggatgagattgaaggacgggaaagaaattcaagg
ggacaagaatcaaacaacactcttcaaataacagaacctaaagaaatcagtgcagtctcc
aaagatggtgcagtaaatgaaacccgttcatcagtccaccatacacggactaaaaacaac
agacttcaaacatctaacatatctccctctgattcatccagacacaaatctgttgaattt
tcatcaggtgctaagtcaccatcaaagagtggtgcgcaaacacccaaaagcccaccagaa
cattatgtccaagaaacacctttaatgtttagtaggtgcacgtcaggtagctcattagat
agttttgagagtcattctattgctagctctatagctagctctgtggcaagtgaacacatg
attagtgggattataagccctagcgatcttcctgacagccctggtcaaacaatgcctcca
agcagaagtaaaacaccaccacctcctcaaacagtgcaagctaaaaaagatggcagtaag
cctatagttcctgacgaagaaaggggaaaagttgcaaagacagcagtacattctgcaatt
caaagagttcaagttcttcaggaagcagatactctcttgcattttgctactgagagtaca
cctgatggattttcatgtgcatccagtctcagtgctttaagtctggatgagccatatatt
cagaaagatgtacagctgaaaattatgccgcctgttttggaaaatgatcaagggaataaa
gcagagccagaaaaggagtttatagacaataaagctaaaaaggaagataaaagatcagaa
caagaaaaggatatgcttgatgacacagatgatgacatcgatatactagaagaatgtata
atttctgccatgcctaggaaaccttcaaggaaaaacaagaaagttccccaaccaacgcca
ggaaaaccaccaccaccagttgcgagaaaaccaagtcagttaccggtttataaactactt
tcatctcaaaatagacttcagactcaaaagcatgttaatttcacacattcagatgatatg
cctagagtttactgtgttgaaggaacgccaataaatttttctacagcaacatctcttagt
gatctcacaatagaatccccaccaagtgaaccgacaaatgatcagccaaatactgactct
ctgtccacggacttagaaaagagagacactattcctactgagggaaggagtacagatgac
acagatgcaagtaaacctttaaatcctactacagtactggatgaggataaagctgaggaa
ggtgacattcttgcagaatgtatacattctgccatgcctaaaggaaaaagtcacaaacca
tacagagtcaaaaaaataatggatcagattaatcacacgtcagctgcaacgtcctccggt
aatagcagaagtatgcaagaaactgataaaaataagccaacctcaccagtaaaacctatg
ccacaatctattggtttcaaagaacgcttaaagaaaaacacagagttgaaactaaatcct
aatagtgaaaatcagtactgtgatccgaggaaaccgagtagtaaaaaaccctcaaaagtt
gcaaatgaaaagattccaaacaatgaagagagaactaaaggatttgcatttgattcccct
caccattatacgccaattgaagggacaccatactgtttttcgaggaatgattcattaagt
tccctagattttgaggatgatgatattgatctttccaaagaaaaggcagagttaagaaaa
gaaaagggaacaaaggatactgaccaaaaagtaaaatacaaacatgagaatagagctata
aatccgatgggcaaacaagatcagactggaccaaagagcttaggaggaagagatcaacct
aaagcattagtacagaaaccaacttcattctcttctgcagcaaagggaacccaagacagg
gggggggctactgatgagaaaatggaaaattttgccattgaaaatactcctgtttgcttt
tctcggaattcatccttgagttcactaagtgatattgatcaagagaacaataataaagaa
actgagcctttaaaacaaaccggaacatctgaaacacagctaggactgcgcagacctcaa
acttcagggtatgcacctaaatcttttcatgtggaggacacaccagtgtgtttttctagg
aacagttctctcagttctttgagtatagactctgaagatgatttgctacaggaatgcata
agttctgcaatgcccaagaaaaggaagccttcaaaaattaagaatgaagtggggaaaagt
cgttcaaatagtgttggtggcattttggctgaggaaccagatcttacactggatctgaga
gatattcaaagccctgattctgaaaatgcattttctccagactctgaaaactttgactgg
aaagcaattcaggaaggtgcaaattcaatagtgagtcgtttacatcaagctgctgctgct
ggttcactctcccgacaaggctcttcagattctgattcaattctttcattgaaatcagga
atttccttgggatccccattccatcttactttagacaaggaggaaaagactatcactagt
aacaaagggccaaaaattttaaagccagctgagaaaagtgcactcgaaaataaaaaaact
gaagaggaacctaaaggaattaaaggtggcaagaaagtttataagagcttaataacaggg
aaatcacgttccagctcagacttctcaagtcattgtaaacaatcagtgcaaacaaatatg
ccctccatctcccgtggaagaacaatgatccatattcctggtgttcgtgctagctctccc
agcacaagtcctgtatcaaagaaagggcctgtttttaaaaatgtaccatcgaaaggttca
aatgaaaaccctagttctagtagttcacccaaaggtacaaaacctttaaaatcagaattg
gtatatggcagcaggccatcatcaacaccaggtggatcaagtaaaggaaactccaggtca
ggatctagagattctgcttcttcaaggccatctccacaaccattaagcagaccgttgcag
tctcctggtcggaactctatttcacctggtaaaaatggaataagtcccccaaacaaattt
tcgcaattgccaaggaccacatcacctagtacagcatctacaaaatcatctggctcagga
agaatgtcttatacatccccagggaggcagctgagtcaaccgaaccttagcaaacaatca
ggactgcccaaaactcatagtagtatacctcgaagtgaatccgcatcaaagagtttgaac
caaaatgtaaacactggctcaaacaaaaaagtagaactgtctagaatgtcctccacaaaa
tccagcggaagtgaatctgaccgatccgagagacctgctttggtgcgccagtctaccttt
attaaggaagcacctagccctacattaaggaggaaactggaagaatctgcatcatttgag
tccttatcttcctcctcaagagcagattctccaccaagatctcaaactcagacacctgct
ttaagcccctctcttcccgatatggctttatcaacgcactccattcaagctgggggatgg
cgaaaaatgcctcccaacctgaatcctgctgcagaacatggggatagccgcagacgtcat
gacataagtcgatcgcattcagagtctccatccaggcttccaatcacacgatcaggtacg
tggaaacgtgaacacagtaaacattcatcttcacttcctcgtgttagtacgtggagaaga
actggaagctcatcatccattctttctgcttcatccgaatctagtgaaaaagcaaagagt
gaagatgaaaagcagcaggtatgttcctttccaggacctagatcagagtgctcgtcttct
gcaaaaggaacttggagaaaaataaaagagagtgaaattcttgagacccccagtaatggc
tcatcaagtactattgcggagtccaattgtagtttagaatctaaaactttagtttaccaa
atggctcctgctgtttctaaaactgaggatgtatgggtaaggatcgaggattgcccaatt
aataatccaagatcgggaaggtcccctactggtaactctccaccagttattgataatgtt
ttagatcagggtcaaaaggaagaggcagcaaaggattgccataccaggcacaattcgggc
aatgggaatgtacctttgctggaaaatagacagaaatcatttattaaagtggatggctta
gatactaagggaactgacccaaagtctttaataaacaaccagcaagagacaaatgaaaat
actgttgctgagcgtacagcatttagctcaagcagctccagcaaacacagctcgccaagt
ggaactgttgcagcgcgagtcacaccctttaactataaccccagccccagaaaaagcaac
ggcgagaacagcacatcacgaccttcccagattcccaccccagtgactaatagtacaaag
aaacgggactccaaaacagaaacaacagactctagtggatctcagagccccaaaaggcac
tctggttcttatctggtgacttcggtttga
DBGET
integrated database retrieval system
