Xenopus laevis (African clawed frog): 447632
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Entry
447632 CDS
T01010
Symbol
nfkb1.L, ebp-1, kbf1, nf-kappa-b, nf-kappaB, nfkb-p105, nfkb-p50, nfkb1
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 L homeolog
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04210
Apoptosis
xla04218
Cellular senescence
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla04623
Cytosolic DNA-sensing pathway
xla04625
C-type lectin receptor signaling pathway
xla04920
Adipocytokine signaling pathway
xla05132
Salmonella infection
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
447632 (nfkb1.L)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
447632 (nfkb1.L)
04218 Cellular senescence
447632 (nfkb1.L)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
447632 (nfkb1.L)
04621 NOD-like receptor signaling pathway
447632 (nfkb1.L)
04622 RIG-I-like receptor signaling pathway
447632 (nfkb1.L)
04623 Cytosolic DNA-sensing pathway
447632 (nfkb1.L)
04625 C-type lectin receptor signaling pathway
447632 (nfkb1.L)
09152 Endocrine system
04920 Adipocytokine signaling pathway
447632 (nfkb1.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
447632 (nfkb1.L)
09171 Infectious disease: bacterial
05132 Salmonella infection
447632 (nfkb1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
447632 (nfkb1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
447632 (nfkb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Death
Motif
Other DBs
NCBI-GeneID:
447632
NCBI-ProteinID:
NP_001087808
Xenbase:
XB-GENE-985749
UniProt:
Q66IP9
LinkDB
All DBs
Position
1L:complement(78110045..78174799)
Genome browser
AA seq
959 aa
AA seq
DB search
MAQNMYDIDDAHLETFLRINPLFQEPMYMPSEPHLRNAEGPYIEITEQPKQRGFRFRYVC
EGPSHGGLPGASSEKNRKSYPQIKIHNYVGQVKVVVQLITNSKDIRLHAHSLVGKNCEDG
ICSLTVGPKDTIVGFPNLGILHVTKKKVIEILEARMTDAFKKGHNAALLVHPELNYTNSE
DRPLNEREKEIIRQAATQQSKDIDLSVVRLMFTAFLLDSEGRFTRSLEPVLSVPIFDSKA
PNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDENGGYWEGFGDFSPTD
VHRQFAIVFKTPKYKDVNITKAASVFVQLRRKSDYETSEPKPFLYYPEIKDKEEVQRKRQ
KLMPNFSDGYGGSGAGSGGGVGGGLYGGGGGAGGSAGGGYGFSSFSYNNYGGLNFHGGPM
NSGPCMKHESKSRCEEANQKHGETTNTQDASNEGSCLCIKTAQEKEERETAPAREEGEFC
KLHDCNFLSKAMQLAKRHAASLFDYAVTGDVRMLLIVQRHLASVQDENGDNILHLSIIHL
HSALVRIFLDITQGVVCDDIINVRNDLYQAPLHLAVITQQVDTVQDILEAGGDPLLLDRD
GNSVLHLACKEGDALTLSLLLKHKKTLEIINLPNNDGLNPIHVAVLANCMSCLRLLISAG
ADVNAQEQKSGKNALHLAVEQENISLAGCLLLEGDACVDSTTYDGNTPLHIAVGRSSTKL
TALLKAAGADSFIESFEPLYSFEDTQDEDDVDEGIVPGTKPLDIANCNEVLEILNGMPYR
SEVAPEDSLTQGDMKNLSKEVNQKLYNLLESQDLDKNWATLAQKLGLGMLNNAFRLSPLP
SKTLLDNFEVSGGTIRELLDALKRMHYTEAIEAIEQSQGILTLSGATTSSEAPIAAQRRD
SSMDDISYLKHQETESTCDSGVETSFQKLSISYSEFLKETEGICTELPQEPDCPLICSK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaacatgtatgatattgatgatgctcatttggaaacatttttacgtataaac
cctttatttcaagaacctatgtatatgccttctgagccacaccttcgaaatgctgaaggg
ccatacattgaaattacagaacaaccaaaacagagagggtttcggtttcgatatgtctgt
gaagggccatcacatggaggacttcctggggcttcaagtgaaaaaaacagaaagtcatac
ccacaaattaagattcataattatgttggtcaagttaaggttgtagtgcagctgataact
aacagcaaagacatccgactgcatgcccatagtctagttggtaaaaactgtgaagatggc
atctgttctctaactgtaggacctaaagatacaattgttgggtttcctaacctgggaata
cttcatgttacgaagaagaaagtgattgagattctagaggctcgcatgacagatgccttc
aaaaagggacacaatgctgcattattagtacacccagagctcaactataccaactctgaa
gataggccattaaatgagcgagaaaaagaaatcattagacaggccgcaacgcaacagtcc
aaggatatcgacctgagtgtggtgcgactcatgttcactgctttcctgctagatagcgaa
ggtcgatttactagatctcttgagcctgtattatcagttcccatctttgatagcaaagcc
cccaatgcatccaatcttaaaattgtgcgaatggacaggactgcaggctgtgtgacaggt
ggggaagaggtatatctcctgtgtgataaagtacaaaaagatgacattcaagtccgcttc
tatgaagaggatgaaaatggaggctactgggaaggatttggagacttctctcctactgat
gttcatagacagtttgccattgttttcaaaacgcccaagtacaaggatgtaaatattaca
aaggcagcgtctgtgtttgttcagcttcggaggaaatcagattatgaaactagtgaacct
aaaccatttctttactacccagaaataaaagacaaagaggaagtacaaaggaaacgccag
aagctcatgcctaatttttcagacggttatggtggaagtggtgcaggatctggtggaggt
gttggtggtggtttatatggaggaggaggaggagcaggaggctctgcaggtggtggctat
gggttttcttcattcagctataataattatggaggtttgaattttcatggaggccctatg
aattctggtccatgtatgaaacatgagtccaagtctcggtgtgaagaagccaaccaaaaa
catggtgagaccacgaatacccaagatgcatctaatgaagggtcatgtttgtgcatcaag
actgcacaagagaaggaagagagagagacagctccagcaagggaggaaggggagttctgc
aaactgcatgactgtaatttcctgagcaaggcaatgcagctagcaaagcgtcatgcagca
tccttgtttgactatgctgtaactggagatgtgaggatgttattaattgtgcagcgccac
ctagcttcagttcaagatgagaatggggacaacattctccacctgtctattatccacctc
cactctgcattagtaaggatcttcttggacataacacaaggggttgtgtgtgatgatata
atcaatgtgagaaatgacctttaccaggctccactgcatttggctgtgatcacccaacaa
gtcgacactgtgcaagatattctagaagctggaggtgacccattgctcttggaccgtgat
ggcaactcagtcctacatctggcttgtaaagaaggggatgccttgacattaagtttactg
cttaaacacaaaaagacgctggagatcatcaaccttccaaacaatgatggcttgaatcca
atccatgttgctgtacttgcaaattgcatgtcgtgcctccggctattgatatcagcagga
gcagatgtaaatgctcaggaacagaaatcaggaaaaaatgcgttgcatttggctgtagaa
caagaaaacatatctttagctggctgtcttcttctggagggagatgcatgtgttgatagt
accacatatgatggaaatacaccgcttcacatagcagttggaagaagctctacaaagctg
acagcacttctcaaagccgcaggtgccgattctttcattgaaagctttgaaccactctat
agctttgaagatacccaagatgaagatgatgtagatgaaggcattgtaccaggcacaaaa
cctctggacatagctaactgcaacgaggtacttgaaatactgaatggcatgccttacagg
tcagaagtagcccctgaagactccctgacacaaggtgacatgaaaaacctaagcaaagaa
gtaaatcagaagctgtacaacttgttagaaagccaggatttggacaagaactgggccacc
ttagcacagaagctgggtcttgggatgctgaacaatgctttcaggctaagtcccctccca
tctaaaacattactagacaactttgaggtttctggtggaaccataagagaactcctagat
gcattaaaacggatgcattacactgaagctattgaggccattgagcagtcacaaggtatc
cttacgttgtctggggctactacttcttcagaggcaccgattgctgcacagaggagagac
tcctccatggatgatatcagttaccttaagcatcaggagactgaaagtacatgtgacagt
ggtgtggagacatcctttcagaaactgagcatttcatattcagaatttctgaaggagaca
gagggaatttgcacagagcttccgcaggaaccagactgtcctctcatctgcagcaagtga
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