Xiphophorus maculatus (southern platyfish): 102219551
Help
Entry
102219551 CDS
T02923
Name
(RefSeq) poly [ADP-ribose] polymerase 4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03410
Base excision repair
xma04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102219551
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102219551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102219551
03036 Chromosome and associated proteins [BR:
xma03036
]
102219551
03400 DNA repair and recombination proteins [BR:
xma03400
]
102219551
Enzymes [BR:
xma01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
102219551
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102219551
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102219551
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102219551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VWA
VIT_2
BRCT
VWA_2
BRCT_2
VWA_CoxE
TniB
Motif
Other DBs
NCBI-GeneID:
102219551
NCBI-ProteinID:
XP_023192098
Ensembl:
ENSXMAG00000007400
LinkDB
All DBs
Position
7:complement(27621490..27673824)
Genome browser
AA seq
1786 aa
AA seq
DB search
MGVFDNCSVLLELKNLPFKEKKKLKSIVTLNGGSISFIVNKQCSLVVTSDLSNLSSNRLR
SIQKNQTPVVGFDYLYKCVERGVLLSLDEYKMDTSSSLDPPPPWKSPQRAPLTYKGPTSS
EGPAVEKNNQKFRIYKESDSALPAFPDDFQVAKYSVFGQENGSRFCVLELQSAKGEQGRR
YRVARYLKDDVVSKKTAVMDRLVFLSTSEEALDVYKALSEELDRSELQRMSSLPAEAPHL
GSAPLQQLLLEEKLNSDELSPDVAAFVELLWTEALGCLGNILRVPISRLSLNDVSRAEGL
LLQAQRKLKEGNEEEASSLLDEVFTLLPHREPRPQSPTARFLSQKLDLCQLIRDVLNVSE
MTLNDPKPSSVGKYRALRCHIEAIPRSSSVFQNVAALLADRSVQIQQIMRVNRAVELQTF
QSEIGNVKPLLHSSSPSNFVGIMSRGLLLPHVGVEHHGITRTDVGNLGSGIYFGDALSTS
LKYAKPSETDGSRLLLVCDVALGVSKDLYKRDQTLTEAPEGYHSVHGVRRTNKTTSDFED
DEYVVYSIDQVKIKYVVQFRKEGDEQKNFSPDINLTAEPIESAKNPGLTSEHVEEDLENV
KNPLEDVKAGLLDSSGQQLPLQAVHVKCKLMDLLSQVIIFQKYTNQSSVPIEAKYVFPLD
DSAAVCGFEAFINGKHVVGEVKEKETARKEYKQAIAKGHGAYLMDQDAPDVFTISVGNLP
PGATVLIKVTFVSELVVRDGSILFSLPGSVAPWQESAALNQTTQVSVEKVCVANESAREF
TLDMSVEMPFEISSLTCITHQVKIKRTDCKAVISVLPGHVMGSDGFQMSVTLSEVHLPRM
WVEKHPDKNSQACMLVFYPNFEFDSSSEGSEVVLLLDTSESMKEESFQLAQKIALQVLKN
LKNDVKINIVLFGTDHTEAFLTTQKLNEVQAEAKKFIKSCSSVGGSTELWRPLRALSLLP
PSDGVRNLLLLSDGHIQNAAATLQLLRDNVQHSRLFTCGFSSTANRHMLRALAQAGGGAY
EFFDSKAKYTWAEKVERQVKRMSSPGCSSVSVKWQQFNPRAPPVQAPKQLNALFNDCHTL
VYGFVPHCTQATLLGDLRGQELQTMVSTTELQKTRGTFLHKLTARALIRDYEDGNLDITE
AEHEGKKAELKSFIIDLSKEFSILSQFTSFVAIEERDSEKADDGVTDIPKLVAEEDVDFL
PYINWSLPEDKEKVVVCDAELSEESDRDMMYDDNVLLAHHEIYGYHDAPDMSLCDMLSAE
LCSTVEIYDDLYAPDMSLCGRDYGEDLYNRLPPKKSEELNDEAPEESKRERLRKLLEERN
LGVCYIEPHCEKSEELNDEKSTERDDEAPEESRRKRARKLREERSRKLQGICPWQISCHE
KSTERDDERLRKLLEERSRKLQEEEESERKRLRKLQRLRKLQTSEESEDDKSEEINDERS
RELREEVQTFTHLSTSEESEDDSSEEMDVDKSEEINDERSRELLEEVQTFTHLSSSWKLQ
TSEESEDDTSEESEDDASTDIDDRSEETESSWKLQEKPLELIKKACKYHRSTETQAPIPL
VRLQSQMGMSVAPGSSILWPPSARVSEAPLRRRRALLSNLMDGLVCQAYDIQPHHPSFEA
PDPEEQKLKWIKIFQLQQADGYWELTVELGKLINVNVDAFANVFLKNKGIHSLGAKANAG
IRRLVATLLVLQLMREEELEEGKLLQSLFNLKEPTGSRSERWQQVKKAVDWVRWADREYP
CACSRLEFGWSWESSTRQLLGFERFPPFSPLISLELQKTAAPLAIH
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtttgacaactgttcagttcttctggagctcaaaaacttgcctttcaaggag
aagaagaagctgaaatcaatagtgacattgaatggaggcagcatttctttcatagtcaac
aaacagtgctctctggtggtgacctccgacttgtccaacctgagctccaacaggctgcgc
agcatccagaagaaccagacgccggtggtcggctttgattatctgtataaatgtgtggag
agaggcgttcttctgtctttggacgagtacaagatggacacttcatcatctctagatcct
cctcctccctggaagtcaccgcagagagctccactaacttataaaggtccgacctcatca
gagggaccagctgttgaaaaaaacaatcagaagttcagaatctacaaagagtcggattct
gctctcccagcattccccgatgatttccaggtggcgaagtactccgttttcggacaggag
aacggcagcaggttttgcgtgttggagctgcagagcgccaaaggtgagcagggacggcgc
tatcgtgtggccagatacctgaaggacgacgtggtgtcgaagaagacagctgtgatggat
cggctggtgttcctgtccacttcagaagaagctctggacgtttacaaggcgctgagtgaa
gaactggatcgctctgagctgcagaggatgagcagcttacctgctgaggcgccacacctg
ggctctgcccccctgcagcagctgctgctggaggagaaactgaactccgatgagttgtcc
ccagacgtagcggcgtttgtggagctgctgtggaccgaagctctcggttgccttggaaac
atcctcagagtccccatctccagactcagcctgaacgatgtgagcagagctgaaggcctt
ctgcttcaggctcagaggaaactgaaggagggaaacgaggaagaggcgtcgtccctcctg
gacgaggttttcaccctgctgcctcaccgggagcccagacctcagtcacctacagccagg
tttctgtctcagaagctggatctctgtcagttaatccgggatgttctgaatgtgagcgag
atgaccttgaacgacccgaagccgtcctccgtggggaagtaccgcgctcttcgctgccac
atcgaagccattccccgcagcagctcagtgtttcagaacgtcgccgccctgctggctgac
aggtcggtgcagatccagcagatcatgcgggtcaacagagcggtggagcttcaaacgttt
cagagcgagatcgggaacgttaaacccctcctccattcatccagccccagcaactttgta
ggaatcatgtccagaggtctgctgcttccccatgtgggagtggagcatcatgggattacg
agaacggacgtcggaaaccttggcagcgggatttactttggtgatgctttgagcaccagt
ctgaagtacgccaaacccagtgaaacagacggatcgcgcctcctgctggtctgcgatgtg
gctctgggagttagtaaggatctctataagagagaccagactctgaccgaggctcctgaa
ggctatcacagcgttcacggagtcagacgaaccaacaaaactacatctgattttgaggat
gacgagtatgtggtttactctattgaccaagtgaagataaaatatgtagttcagttcaga
aaggaaggagacgagcagaagaatttcagtccggacatcaacctgactgcagaacccatt
gagtctgccaagaacccaggtctcacttcagaacatgtagaagaagatctagaaaatgtg
aagaaccctctggaggacgttaaagctggactgttggacagttcaggccagcagctcccc
ctgcaggccgtccatgtaaagtgcaaactgatggatctgctctcccaggtcatcatcttc
cagaaatacaccaatcagagctcagtgcccattgaggcgaagtacgtcttcccgctggac
gactcagctgccgtgtgcggatttgaagctttcatcaatgggaagcacgtggtgggagag
gtgaaggagaaggagacggctcgtaaggagtacaaacaggcgatagccaaaggccacgga
gcgtacctcatggaccaggacgctcctgatgtgttcaccatcagcgtgggcaacctgccg
cctggtgccactgtcctcattaaggtgacctttgtgtcagagctggtggtcagagacggg
agcatcctgttctccctgccgggtagcgtggctccatggcaggaaagcgctgcgctcaac
cagaccacacaagtctctgtggaaaaggtttgtgtggccaacgaatcagcgagagagttt
acgttggacatgtcggtggagatgccctttgagatctctagcctgacctgcatcacccat
caagtcaaaattaagaggactgactgtaaggcagtgatcagtgttctgccgggtcacgtc
atggggtcagatggtttccagatgtctgtcactctctctgaggttcatcttcccagaatg
tgggtggagaaacacccagacaagaacagccaggcctgcatgctggttttctacccaaac
tttgagtttgactccagctctgaaggcagtgaagttgttcttttgctggacacgtctgag
tccatgaaggaggaatcgttccagctggcccagaaaatcgccctgcaggttttaaagaac
ctgaagaacgacgtcaaaatcaacattgttttgtttggaacagatcacacagaagctttc
ctgacgacccagaaactcaacgaggttcaagctgaagccaagaagttcatcaagagctgc
tcctcagtagggggcagcactgagctgtggcggcctctccgggcgctcagtctgctgccg
ccgtccgacggcgtgcgaaacctgctgctgctgtcggacggccacatccagaacgcggcg
gccacgctgcagctgctcagagataacgtccagcacagtcgcctcttcacctgcggcttc
agctccacagccaatcgccacatgttgagagccctggctcaggcagggggcggagcttat
gagttttttgactctaaagcgaagtacacctgggctgagaaggtggagcgccaggtgaag
cgcatgtcgtctcccggctgcagctccgtctctgtgaagtggcagcagttcaaccccaga
gctcctccggttcaagccccgaagcagctgaacgctctgttcaatgactgccacacgctg
gtttacggctttgtgccccactgcactcaggcgactcttcttggagatttgcgtggtcag
gagcttcaaaccatggtgtcaacaacagagctgcagaagaccagaggaacgtttcttcat
aagctcacagcaagagccctgatcagagactacgaggatggaaaccttgatatcaccgaa
gctgaacacgagggtaaaaaagcagagctgaagtccttcatcattgatctgagcaaagag
ttctccatactgtctcagttcaccagcttcgtggccatcgaagagagggattctgagaag
gcagatgatggcgtcacagacatcccaaagctggtcgcagaggaggatgtggacttcttg
ccatacatcaactggagtcttcctgaggacaaagaaaaagttgtggtttgtgatgcagag
ttatctgaagaaagcgatcgcgacatgatgtatgatgataatgtcctgcttgctcatcat
gagatttatggctaccacgatgcacctgatatgagcttgtgcgatatgctgtccgcagaa
ctttgctccactgttgagatatatgacgacctctatgcacctgatatgagcttgtgcggg
agggactatggtgaagatttgtacaacagattacctcctaagaaatctgaagagttaaat
gacgaagcacctgaagagagcaagcgcgaaagacttaggaaactcctggaagaaaggaac
cttggtgtatgttacattgaaccacattgtgagaaatctgaagagttaaatgacgaaaaa
tctacagagagagatgacgaagcacctgaagagagcaggcgcaaaagagctaggaaactc
cgggaagaaagatctaggaaactccaggggatctgtccatggcagatatcatgtcatgag
aaatctacagagagagatgacgaaagattgaggaaactcctggaagaaagatctaggaaa
ctccaggaagaagaagagagtgagcgcaaaagattgaggaaactccagagattgaggaaa
ctccagacatctgaagagagcgaggacgataaatctgaagagataaatgacgaaagatct
agggaactccgggaagaagtacaaaccttcacacatttatcgacatctgaagagagcgag
gacgattcatctgaagagatggatgttgataaatctgaagagataaatgacgaaagatct
agggaactcctggaagaagtacaaaccttcacacatttatcgagttcttggaaactccag
acatctgaagagagcgaggacgatacatctgaagagagcgaggacgatgcatctacagat
atcgacgatagatctgaagagactgagagttcttggaaactccaggagaaacctctagag
ttaataaagaaagcttgtaagtaccacaggagcacagagacacaggccccgatcccactg
gtgaggctgcaatcacagatgggtatgtctgttgctcccgggtcctccatactttggcct
ccatctgcaagggtcagtgaagctccactacgtcgtcgtcgtgcattactttcaaatcta
atggatggtctggtttgtcaagcatatgatatacagccacatcatccatcctttgaagct
ccagacccagaagagcagaagctgaagtggattaagatcttccaactgcagcaggcggac
ggatactgggagttaactgttgagctgggaaaactgatcaatgtcaacgtggatgcgttt
gctaacgtgttcctgaagaacaaaggcattcattctctgggtgcgaaggccaacgcaggc
atccggaggctggtggcgactctgttggttctgcagctgatgagggaggaggagctggag
gaaggaaaactcctgcagagtttgtttaacctgaaggagccgactgggtccaggtctgag
cgctggcagcaggtgaagaaggcagtggactgggtgcgttgggccgaccgggagtatccg
tgcgcctgcagccggctggagttcggctggagctgggagtcttccacccgccagctgctg
ggcttcgaacgcttccccccgttctcaccgctcatcagcctggagctgcagaagaccgca
gcgccgctggccatccactga
DBGET
integrated database retrieval system
