Xiphophorus maculatus (southern platyfish): 102222745
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Entry
102222745 CDS
T02923
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102222745 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102222745 (polr1b)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102222745 (polr1b)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102222745 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
102222745
NCBI-ProteinID:
XP_005795235
Ensembl:
ENSXMAG00000007723
UniProt:
M3ZZW5
LinkDB
All DBs
Position
22:complement(246180..259399)
Genome browser
AA seq
1134 aa
AA seq
DB search
MEPSDKWANLPQGPSLKNLTDGGFGKLKDKQHPAVQDLTKAHIESFNQAVTEGLARVVLA
IPPLEFMFRQDKVTLAFVEASIHNPVVTKGSVCTEMKVYPAECRGRRCSYKGKLVADISW
AINGIPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELVKHHEEAEEMGGYFIMNGIEKVVR
MLIQQRRNYPVAMSRPKWKSRGQGYTQYGISLHCVREEHSAINMNLHYLENGTVMLNFIY
QKEMFFLPLGFALKALVDFTDFQIYQELIKGSEDNSFYKTCVSEMLRMVSEEGCTTRSKL
LDYLGERFRVKLSVPEWYTNEQCANFLLNECLCIHLKSDLEKFYLLCFSTRKLFSFAKQE
CMEENPDSLMCQEVLTPGQLYLMFLKERLTAWLTSVKLSFDKRGSKLTGELSTENVMKLL
TMGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVVTATAYTTALPTLLCSLGVT
PVDGSPGQAFSDCYPVVLDGSVVGWVEADLAPSVADSLRRFKVLGQKKVPPWTEIVLVPK
TGKPSLYPGLFLFTTLCRMMRPVQNLALGKQELIGTFEQLYLNVGILEAEIEPGVSTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYNLDNYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVKGEDGVVFGAKPGDPKVNGKLDADGLPHIGSVLQYGDPFYSYINLNTGQSYVSFY
RSQEACVVDNIKVCSNDTGSGLFKRVCITVRVPRNPMIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLSHDATPFTFSEQNSALEY
FGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPLGGRNVQGGIRFGEMERDALLAHGSSFLLQDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPFWSAMRHRKTVCSLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagccttctgataagtgggcgaatttgcctcagggaccgagtttgaagaacctgacg
gatggaggcttcgggaaactgaaggacaaacagcaccccgccgtccaggacctcaccaag
gcccacatcgagtcctttaaccaggctgtcaccgaggggctcgctcgggtcgtcctggcc
atcccgcccctggagttcatgttcagacaggacaaagtgaccctcgcctttgtggaagcc
tccatccacaacccagtggtcaccaagggcagtgtctgcaccgagatgaaggtttacccc
gcagagtgccgaggcaggaggtgctcctacaaaggaaagctggtggcggacatcagctgg
gcgatcaatggcatcccgaaaggcatcatcaagcagtccctgggtcaggtgccgatcatg
gtgaagtccaagctctgcaacctccacggcttgtcgcctaaggagctcgtaaagcatcat
gaagaggcagaggaaatgggaggttacttcatcatgaacggcatcgagaaggtcgtccgt
atgctgatacagcagaggaggaactatccggtcgccatgtccaggcccaagtggaagagc
cgcggtcagggatacacccagtacggtatctccttgcactgcgtgagggaggagcactcg
gccatcaacatgaacctccactacctggagaacggcaccgtgatgctgaacttcatctac
cagaaggagatgttcttcctgccgctgggcttcgctctgaaggctctggtggacttcaca
gatttccagatctaccaggagctgatcaaaggcagcgaggacaactccttctataagacc
tgcgtgtcagaaatgctgcgcatggtgtcggaggagggctgcaccacccgcagcaagttg
ctcgactacctgggcgagcgcttccgggtcaagctgagcgtaccggagtggtacaccaac
gagcaatgcgctaacttcctgctaaacgaatgcctctgcatccacctgaagtcggacctg
gagaagttctacctgctgtgcttctcgacccggaagctcttcagtttcgccaagcaggag
tgcatggaggagaacccggacagcctgatgtgccaggaggttctgactccgggtcagctc
tacctcatgttcctgaaggagagactaacggcgtggctaacatcggtgaagctttccttc
gataagcgagggtccaagctgaccggcgaactgagcactgagaatgtgatgaagttgtta
accatggggtcggatttaaccaaaccgtttgaatatctgctggccaccggaaacctgcac
tccaaaacaggtctcggcatgctgcagaacacgggcctgtgcgtcgtggccgacaaactg
aacttcatccgctacctgtcgcacttccgctgcgtccacagaggagccgccttcgccaag
atgaggacgacgtcggtcaggaagctgctgccggagtcctggggcttcctgtgtccggtc
cacacgccggacggcgagccctgcggcctcatgaaccacatgacggcgagctgcgaggtc
gtcaccgccaccgcgtacaccaccgcgctgccgacgctgctctgctcgctgggtgtcacc
ccggtggacggttctccgggtcaggccttctctgactgctacccggtggttctggatggg
tccgttgtcggttgggttgaagctgatttggctccatccgttgccgactcgctgcgccgc
tttaaggttctgggacagaagaaagtccctccctggactgagatcgtcctggttcctaaa
accgggaagcccagtttgtatccgggcctgttcctcttcactacgttgtgccgcatgatg
cgacccgtccagaatttggctcttgggaagcaagagctgattggcacgtttgaacagctt
tacctcaacgtggggatcctggaggcggagatagagccaggtgttagcacgcaccaggag
cttttcccccacagcatgctcagcgtggtggccaacttcatcccctactccgaccacaac
cagagccccaggaacatgtaccagtgccagatggggaagcagacgatgggattcccgctg
cactcgttcacggatcgctctgacaacaagctgtaccggctccagacgccgcagagcgct
ctggtccggccctacatgtacgaccactacaacctggacaactacccgagcggcaccaac
gccgtcgtcgccgtcatctcctacacgggctacgacatggaggacgccatgatcgtgaac
aagtcgtcgtgggagagaggctttgctcacgggagcatctacaagacggagttagtggac
ctggcggagaaggtgaagggtgaggacggcgtcgtgttcggggccaagccgggcgacccg
aaagtgaacgggaagttggatgcggacgggctgcctcacatcgggtcggtgcttcagtac
ggagacccgttctacagctacatcaacctgaacacgggacaaagctacgtcagcttctac
aggagccaagaggcttgtgtcgtcgacaacataaaggtctgcagcaacgacacgggatcg
ggtctcttcaaacgtgtctgcatcaccgtccgagtgcctcgtaacccgatgatcggcgac
aagttcgccagccgccacggtcagaagggcatcctgagccgcctgtggccggccgaggac
atgccgttcaccgagagcggcatgagcccggacatcctcttcaacccgcacggcttcccg
tctcgcatgaccatcgggatgctgatcgagagcatggccgggaagtcggccgccatgcac
ggcctgagccacgacgccacgccgttcaccttctccgagcagaactctgcgctggagtac
ttcggggagatgctgcgcgccggcggctacaactactacggcacggagcggctctacagc
gggctgagcggccaggagctggaggccgacatcttcatcggcgtcgtgtactaccagcgg
ctccgccacatggtgtccgataagttccaggtgcgcacgacgggagcgcgggataaggtg
accaaccagccgctgggaggaaggaacgtccagggtgggattcggttcggggagatggag
cgggacgcgctgctggcccacggctcgtccttcctgctgcaggaccggctgttcaactgc
tcggaccgctccgtggcgcaggtgtgcgtggactgcggcagcctgctgtcgccgctgcta
gagaagccgccgccgttctggtcggccatgcgccaccggaagacggtgtgcagtttgtgt
gggaagagcgactccgtggactccgtgtctgttccgtacgttttccgttacttcgtggct
gagctagcagcgatgaacatcaaagtgaaactggatgtgaagtga
DBGET
integrated database retrieval system
