Xiphophorus maculatus (southern platyfish): 102229418
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Entry
102229418 CDS
T02923
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR isoform X2
KO
K09291
nucleoprotein TPR
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102229418 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102229418 (tpr)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102229418 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Jnk-SapK_ap_N
Motif
Other DBs
NCBI-GeneID:
102229418
NCBI-ProteinID:
XP_014326044
Ensembl:
ENSXMAG00000002445
LinkDB
All DBs
Position
9:5183486..5212788
Genome browser
AA seq
2352 aa
AA seq
DB search
MAALLLQELDSSDISKLPTTLQSKFEKLLLDRQYEIDSLKALHEQFRVDSEQQFFEKVDQ
LQRCQAELLSQAQEHLKVKEDFTKLDEELKSVCEKNRENESAQEKLSTEQTLLLKAKEEL
EGEKRELVRTLERRSLEVENLNDDLRQLNDKLMEVNTSKMAMQMKLDEHEAAEVNIKYKE
KRMEQEKELLHGQISWLKDELKAKTEGLLTLSREKGNEILELKFKLENKEDELTKLQDQV
TSLKTSNDHLQKQSEEMVNKLKEAKEQQANSEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSRAVEELHKLLKDAGEANKALEEKLQEMNDAADKTVNELKEKIQSLEKELDNANDLL
STSKLRGPAGASVPAENQITTMSPTAAAVSKIKPGMKLTELYTAYLESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQNEADEANK
RSTLLERDSQRYELQVADMAQQVRVLLIELEEARGNHVLQEEEVSSADISSTSEVISQHL
VTFRSVEELQKQNQRLLVALRDLSDAQEKEEQESTGNKRVELEQSLEKAQAELESLKEQR
SQQIKMTESIVRQRDMYRVLLAQATGVAFPQQGTPPEEFSLTSNPRRSPATTPTALVTMA
ESAEALEAKAALRQLQEVFSAYKKERLDSDKAMNEQNEKLQEQLSDLRSQNAKISTQLEF
ASKRYEMLQDNVEGYRKEIASLREKEQKMAATTQKLEQTVHTLNEDLKAAKEKLTLTEGQ
AEKLRKERDMLKLVESRLNQEKETFVSQQQSQNLLLTNLQAIQATLERAEADTRQRLNSQ
IEKQELQISQLQKRLEQEVEQRHLCSRTQEVQLIDVKRQLETQVALHQKTKELLNAAELE
LNTLRMQQGRTEARHTLGSPSTPVFRGLQGSDQEREELQGRLQLAETRAEELAESLRAAT
ASMEQYRAMAQSLEESLETEKQVTEQARLSVEACLKEAQERHRTLEEKLQEAEKEKQELE
ESKKKDLASLEEQINDLKRSLSGAQTDHQAVLQQLAVAETQKQQALQDRQEQAKLAAEAQ
DKYEREMMLHAADVEALQAAKAQALQAAELRNQLEEKVQRVGAELLEARVSWEVQEKILK
EETSKMESRYEELQRQNTLLHEQVQSMSTNMAASIQRAANESSLNVSLSEEGKSQDQLLE
ILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELREVQDSLTAARERMQVTAKTLAQ
HDELMKKTETMNILVETNKMLREEKTKMEQELQQTQAKVQKMESDVFPLQQSNSELSEKN
GMLQAEKAILEEDIKRWKARTQNLLSQQKDSDPDEYKRLNTEKELHLKRIQQLTEENSRL
KAELNKINNLTTSLQGQMQNMRESMSKANDDRNVLRKDLETKNQEIQEKVRTITQVKKIG
RRYKMQYDELKVQHDKLVADAAAGPSQDEEAHQASAQELQSVKDSLNQAETRTKELEGQL
ENINKVVTERETELRNVQEQSSRLQTELNRLRQELQEKTTQEESLRQQMAEKDEKTRKAL
LVARQKISHVTATKEQLQRENEELKQQREELEVRVSALRSQYEGRLSRQERELRDLRGQQ
ERQEQRDEPPEAGPSKTQEQQRTTEQRQISLKTTPAADRGSTSASEPPTANIKPTPVVAT
ASKQPVNPGNKPTPRASIRPMITPVPPPTPTATVMPTTQVETQEAMQSTEAPPVEHVTVY
GSASGSVRSASPNVQTTLAGSMLTVQQTQIQATAFVQPTQQQSVTHPEPDNREPSPVTIE
ATPSSQVEWPSTSSSSSSSVFGTVSATPGTSTLSKRPREEEESSAAAFTEVEATQEEPRA
PMAKKLRIIQRVGPEEEVMADESAEAEGVVPSDSQDGAKASQAEFSNLEEAEEDSASQSV
PAEPAVTPSQSETPDQLQQEVIVILTDSESEEEEEEEGEEQDYAEEEEEDEEEEEEEEEE
EDEDEEDEDDGGMEEEGEESNEGSGDGNEVYEGDDTEGADVTDPGTETEESLGASDSTQR
PADSQTPSFEGSPMEALSAEQPITSSGARIPQSPRRPVQQLLPQLNIHPAQSSELGPSAQ
RIRRQSVGRLNPGMPSSAQHFFEEDDRMVPSIPTLVPPRSEGFDQAIHSPQVAGVPRFRF
DLSEDVPQTSSSSHSDLGQLASQGGLGLYESPLFLATHEEESGGRSVPTTPLQVAAPVTV
FSEAAQSDATEHASQSVPMVSTSTPGLVLPGTAGGGEERDIFLEPDTESAEASVDAVVSQ
GDAEEPSQPSDKANLPSTSQEPSSSSADTVPKPARPGQPRQLQRWQDSRGGRMKRGGQSF
PPRGFHGRRFLR
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgttgcaggagctggattcgtccgatatatctaaactaccgacaact
cttcaaagcaaatttgagaaacttttattagatcggcagtatgaaattgattctttaaaa
gcactgcatgaacagtttcgggttgacagcgagcaacagtttttcgaaaaagttgatcaa
cttcagcggtgtcaggcggagcttttgtctcaagctcaagaacatcttaaagtcaaagag
gatttcacgaagcttgatgaagaactgaaaagtgtttgtgagaagaacagggaaaatgag
tctgcgcaggagaagttgtcaacagagcagactttgcttttgaaagccaaagaggaattg
gaaggagaaaagcgggaacttgtgaggacactggagaggagatctctggaagttgagaat
ttaaatgatgacttgaggcagctgaatgataagttaatggaagtcaacactagtaagatg
gctatgcagatgaagctggatgaacatgaagctgcagaagtaaacattaaatataaggag
aagcgtatggaacaagagaaggagctgctgcatggtcagatttcttggcttaaagacgaa
ctgaaggcaaagacggagggactgctcaccctgtccagggaaaaggggaatgaaatcttg
gagctgaaattcaaactggagaataaggaagatgagttaaccaaactacaagatcaagtg
accagtttgaaaacctcaaatgaccaccttcaaaagcaaagtgaagagatggtcaacaaa
ctaaaagaagcaaaggagcagcaggccaactcagaggagaagtttcgaaacgaactgaat
gccaacattaaactttccaacttatacaagggtgcggcagcagattctgaagcaaaaagt
gaagagctgagtcgggcggtggaggaactacacaagctgctgaaagatgctggagaagcc
aacaaggctcttgaggaaaagctgcaggagatgaacgacgcagcagacaaaactgttaat
gagttaaaggagaagatccagagccttgagaaagagctggacaacgccaatgacctgttg
tcaacttctaaactcagaggaccagctggtgcgagcgtgccggcagagaaccaaataaca
acaatgtctccaacagcggctgctgtgtccaaaataaaacccggcatgaagctgactgaa
ttgtacacggcgtatctggagagccaggagcagctgcagctggagcgcctggagaacaag
cgtgtcaacaaatatctggatgacattgtgcaggaagtcgaagccaaggcccccatcctg
aaacggcagagggacgaacacgagcgcatgcagaagtcggtggccagtctgtcagccaag
ttggagcaagccgttaaggaagttcaccgtctgcagaacgaggctgatgaagccaataag
cgatctactctcctggaaagagacagtcagagatatgaactccaggtggctgacatggct
caacaggttcgagtgttgctcattgagctggaagaggcccgtggaaaccacgtgcttcag
gaggaggaagtgagctcagccgacatcagcagcacatcagaggtcatcagccaacacctg
gtgaccttccgcagcgtggaggagctccagaagcaaaaccagcgacttcttgtggccctc
agggatctgagtgacgctcaggagaaagaagagcaggagagcactggcaataagcgtgtg
gagctggagcagagtttggagaaagcccaggcagagttggagtcgctgaaggaacaacgc
agccagcagattaagatgacagagtccatcgtgaggcagagagacatgtaccgtgtactg
ctggctcaggcaaccggagtggctttccctcaacaaggaacaccaccggaggagttttct
ctgacatcgaacccccgacgttcaccagcaaccactcccactgcactcgtgaccatggct
gagtctgccgaggcgctggaggccaaggcagcgctgcggcagttgcaggaagtgttctct
gcttataagaaggagcggctggacagcgataaggcgatgaatgagcagaatgaaaagctg
caggagcagctctctgacctccgctctcaaaatgccaaaatatcaactcagctagagttt
gcatcaaagaggtatgagatgctgcaggataacgttgagggctacaggaaagagatcgcc
tcacttagagaaaaagaacagaagatggccgccaccacacagaaacttgagcagactgtt
cacacgctaaatgaagatctgaaagctgcaaaggagaaacttaccttgactgagggtcag
gctgagaagctgcgcaaggagagagacatgctgaagctggtggagtccaggctgaaccag
gagaaagagacatttgtgagccaacagcagagccagaatctactgctgaccaatctccag
gccatacaagccactctggagcgggctgaggccgacacacgtcagcgtctcaacagccag
atcgaaaagcaggaactgcagatctcccagcttcagaagaggctggagcaggaagtggag
cagcgccatctgtgcagcaggacccaagaagtccaactaatagacgtcaaaaggcagctg
gagactcaggtggctttacatcagaaaaccaaagagctgctgaatgcggctgagttggag
ctcaacaccctgaggatgcagcaaggccgcaccgaggcacgccacaccctgggctcaccg
tccacacccgtcttcagaggcctgcagggttcagatcaagagagggaggagctccagggc
cgcctgcagctggctgaaacccgagcagaggaactggcagagagcctgagggccgccacc
gccagcatggagcagtacagagccatggctcaaagcttggaggagtccctggagacagag
aagcaggtaacggagcaggctcgcctgtcagttgaggcttgtttgaaggaagctcaggag
cgacaccggacgctggaagagaaactccaggaagcagagaaggaaaagcaggagttggag
gagagcaagaaaaaagacctggcatctctagaggagcagattaatgacctgaagagaagc
ctcagcggtgcgcagacagatcaccaggccgtgcttcagcagctggctgtagctgaaacc
cagaagcagcaggctctgcaggacagacaggagcaggcaaagctggcagctgaagctcaa
gataaatacgagcgggagatgatgctgcacgcagccgacgtggaggccctgcaagccgcc
aaggctcaggcactgcaggccgccgagctcagaaaccagctggaggagaaagtccagcga
gtcggcgctgagctgctggaggccagagtctcctgggaggtgcaggaaaagatcctaaag
gaggaaacgtcaaagatggaaagtcgctatgaggagctgcagaggcagaacaccctcctg
catgagcaggtccaaagcatgagcaccaacatggccgccagtattcagcgtgccgccaat
gagagctcgctgaacgtttctttgagtgaagagggaaaatctcaagatcagctgcttgag
attctgaggtttgttcgtcgggaaaaggagattgctgaatcccggtttgaggtggcgcaa
ggggagagcttacgtcaccgtctgagagttgaacacttggaacgagaacttagggaggtg
caggacagtctgactgctgcaagggagagaatgcaggtgactgcaaagactctggcccag
catgatgagctgatgaagaagactgaaacgatgaatatcttggtggagaccaacaagatg
ctgagagaggagaaaaccaaaatggagcaggaactgcagcaaactcaagctaaggtgcaa
aagatggagtcggatgtctttcctctgcagcaaagcaactctgagctgagtgagaaaaac
ggcatgttgcaggcggagaaggcgatcctggaggaggacataaagcgctggaaggctcga
actcagaatttgctgagtcagcaaaaagattcggaccctgacgagtacaaacgtctcaac
accgagaaagagctacatctgaaacgcatacagcagctcacggaggaaaactctcgactt
aaagctgagttgaacaagataaataacctaacaacgtcactccagggacaaatgcagaac
atgcgtgaaagtatgagtaaagcaaacgacgacagaaatgtgttgaggaaggacctggaa
actaaaaaccaggaaatccaagaaaaagtgcgaaccatcacccaggtgaagaaaatcgga
cggcgatacaagatgcaatatgatgaactaaaggtgcaacatgacaagctcgttgctgat
gccgccgcaggcccatcccaagacgaggaggcacatcaagcttcagctcaagagctgcag
agcgtaaaagactccctgaatcaggctgagactagaaccaaagaactggagggacagctg
gagaacatcaacaaggtggtcacagagcgggagactgagctgcgtaacgtccaggaacaa
tcgtccaggctgcagacggagctgaaccgcctgaggcaggagctgcaggagaaaacgacg
caggaggaaagtctgagacagcagatggccgaaaaggacgagaaaacacgaaaggctctt
ctggttgccagacagaagattagccatgtcacagccaccaaagagcagctgcagcgagag
aacgaggagctgaagcagcagcgcgaggagctggaggtgcgagtgagcgctctcaggtct
cagtatgagggccgtctcagccgacaggagcgggagctcagagacctgaggggtcagcag
gagagacaggagcagagagacgagccccccgaggcggggccaagcaagactcaagagcag
caaaggacgacagaacagaggcagatcagtctgaagacgaccccagctgcagacaggggc
agcacaagcgcctctgagccgccgaccgccaacattaagccaacacctgtggttgccaca
gccagcaagcaaccggtcaaccctggcaacaaaccgacaccccgggcaagcatcagaccg
atgataacgcctgtgccaccgccaacacccaccgctactgtcatgcctaccacacaggtg
gagacgcaggaagcgatgcagtctaccgaagcgccgccggtggagcatgtgaccgtgtac
ggaagcgccagcggctccgttcgctccgccagtcccaacgtccagaccaccttagcgggc
tccatgctgaccgttcagcagacacagattcaggccacagcattcgttcagcccacgcag
cagcagagcgtcacccacccagagccggacaatcgggagccgtcgcctgttacgatcgag
gccacgcccagttcgcaggtggaatggccttcaacttcctcttcctcttcctcgtctgtg
ttcggcactgtttcagcaactcctgggacgtccaccctgtccaagagacctcgagaggaa
gaggagagcagcgctgctgcgttcacagaggtagaggcgacacaggaggaacccagagct
ccaatggccaaaaagctgcgcatcatccagagggtgggaccagaggaggaagtgatggct
gacgagagtgcagaggctgagggggtggtgccatcagacagccaggatggagcaaaagca
agccaggctgagttttcaaaccttgaggaagcggaggaagattcagcctctcagtcggtc
ccagcagagccggcggtcaccccaagtcaaagtgaaacgcctgaccagttgcaacaggaa
gtcatcgtcatactgacggactctgaaagtgaagaggaggaggaagaagagggagaagag
caggactatgcagaggaggaggaagaagatgaggaagaagaagaggaggaggaagaggaa
gaagatgaagatgaggaggatgaagatgatggggggatggaggaggaaggagaggagagc
aacgaaggaagcggcgatggcaacgaagtttatgagggagacgatacagagggagctgat
gtcaccgacccgggcactgagacagaggagagtttaggggcgtcagactccacccagagg
cccgccgattcccagacaccaagctttgagggaagcccaatggaggccttgtcagcagaa
cagccaatcacaagttccggagcgcgtattccccagtcgccacggcgacctgtgcagcag
cttctgccccaactcaacatccatcccgctcagtcttcagaactgggaccatctgctcag
cgaatccgtcgtcagtcagtgggccgactcaatcctggcatgcccagcagtgcgcagcat
ttctttgaagaagacgacaggatggttcccagcattcccactctggttccccctcgctca
gaaggctttgaccaagctatccattctcctcaggttgctggagtccctcgcttcaggttt
gatctttcagaagatgtgcctcagaccagctcctcctcgcactctgacctcggccagctc
gcctcgcaaggaggtcttgggttgtatgaaagtcctctgttcttggcgactcatgaggaa
gagtcgggtgggcgcagcgttcccaccactcctctgcaagttgcagctccagtaactgtc
ttctcggaggctgcacagtctgacgcaacggagcacgcctcgcagtcggttcccatggtg
agcacgtccacgccgggcctggtgctgccaggaaccgccgggggcggggaggagagagac
atcttcctggagccagacacagagagtgctgaagcgtctgtggatgctgtggtgtcgcag
ggagacgcggaggagccgagccagccgtctgacaaggccaaccttccctccaccagccag
gagccttcctccagctctgcagatacagtccctaaacccgctcgtcccggacagcccaga
cagctgcagcgctggcaggacagccgtggtggtcgaatgaagagaggaggtcaaagcttc
cctccccgcggctttcatgggagacgatttctgagatga
DBGET
integrated database retrieval system
