Xiphophorus maculatus (southern platyfish): 102236407
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Entry
102236407 CDS
T02923
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03020
RNA polymerase
xma04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102236407 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102236407 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102236407 (polr3b)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102236407 (polr3b)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102236407 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
102236407
NCBI-ProteinID:
XP_005802316
Ensembl:
ENSXMAG00000001568
LinkDB
All DBs
Position
2:complement(13713330..13738438)
Genome browser
AA seq
1132 aa
AA seq
DB search
MELLGGEFGDMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNAELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHRKLVNTFRLMRRAGFINEFVSISTNMTDRCVYISSDGGRLCRPYIIVKK
GQPMVNNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQISLYEHLISKETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNTKCILRR
YTNQTFDKVMGPMLDAATRKPIWRHNILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEEAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgggaggagagtttggagacatgactcctcaggagctggcggctcctgtc
aacaccgtggcggaaaagtggaaattgctaccagccttcctgaaggtgaaaggtttggtg
aagcaacacatcgactcgttcaactacttcatcaatgttgagattaagaaaatcatgaaa
gcgaatgagaaaataaccagcgatgctgatccaatgtggtacctgaagtacctgaacatc
tacgttgggatgcctgatgtcgaggagagcttcaacgtaaccagaccggtttctcctcat
gagtgtcgcctcagagacatgacctactcggcaccgatcacggtggacattgaatacact
cgcggcagccagaggatcatccgaaacgctcttccgattggaaggatgccaatcatgctg
cgaagctccaactgcgtcctcacgggaaagacgcctatggagttctctaagctcaacgag
tgtcctttggatccaggaggttatttcatcgtaaaaggccaggagaaagtcatcttgatt
caggagcagctgtccaagaatcggatcattgtggagcaagacaggaagggagcagtagga
gcctcagtcaccagctccactcatgagaagaaaagcagaaccaacatgattgtgaagcaa
ggccgcttctacctgagacacaacacgctgtctgaagacgctcctatcgccataatattc
aagggcatgggtgtagagagtgaccaggagatagttcagatgatcggcacagaggagcac
gtcatggccagcttcgctccgagcctggaggagtgtcagaaagctcagatcttcacacag
actcaggctctgaggtttcttgggaataaagtccggcggcaacggatgtggggaggcccc
aagaagaccaagatggaggaggccagagagctgctcgcctctctcatcctcactcatgtc
cctgtgaaagagtttaactttcgggctaaatgcatttacctggctgtgatggtccggagg
gtgatcctggctcaaggcgacaacaaagtggacgacagagattattatgggaacaagcgt
ctggagttggctggacagctgctgtctctgttgtttgaggatctgtttaaaaagtttaat
gccgaactgaagaagatcgccgaccagatcatccccaagcagcgagccgctcagtttgac
gtggtcaaacacatgaggcaggatcagatcaccaacggcatggtcaacgccatctccaca
gggaactggtctctgaagaggttcaagatggaccgtcagggtgtcacccaggttctgtcc
cgtctctcctacatttcggctctggggatgatgaccaggatctcctcccagttcgagaag
accaggaaggtcagcgggcctcgttctctgcagccgtcccagtggggaatgctgtgtccg
tccgacactcctgagggagaggcctgcggtctggtcaagaacctggctctgatgacacac
atcaccacagacatggaggacgggcccatcatcaaactggccttcaacctcggcgtggag
gacgtcaacctgctgtgcggggaggagctctcctacccgagcgtcttcctcgttttcctc
aacggtaacattctgggcgtcatcagagaccatcggaaactagtcaacaccttcagactg
atgcgcagggcgggtttcatcaacgaattcgtgtccatctccaccaacatgaccgaccgc
tgtgtctacatctcgtctgacggaggacgactctgcagaccgtacatcattgtgaagaag
ggacagccgatggtaaataacaaacacattgaggatctgtctcagggctacagaacgttt
gaggactttctgcatgaaggccttgtggagtacctggatgtgaacgaggagaacgactgt
cagatctccctttatgagcacctgatcagcaaagagacgacacacttggagatcgagccc
ttcacgttgctcggagtgtgtgcgggtctcattccctacccccaccacaaccagtcaccc
aggaacacataccagtgcgctatgggcaagcaggccatgggaactattggctacaaccag
aggaaccgcatcgatactctgatgtacctgctggcctatcctcagaggccaatggtcaaa
accaaaaccatcgagctgattgactttgagaagctgccggcgggtcagaacgccaccgtg
gccgtgatgagttacagcggctatgatatcgaggacgctctggtcctcaacaaagcctcg
ctggacagaggatttggtcgctgccttgtctacaaaaacacaaagtgcattctgaggcgt
tacaccaaccagacctttgacaaggtgatggggcccatgctggacgctgctacccgtaaa
ccaatatggaggcacaacatcctggacgctgacggcatctgttcccccggtgagagggtg
gagaacaagcaggtgctggtgaacaaatcaatgccaaccgtcactcagacgccactggag
ggcagcgcccagccaggtcagccacagtacagagacgttcccatcagctataagggctca
acagactcgtacatcgagaaggtcatgatctcgtccaacgctgaagaagccttcctcatc
aagatcctcctgaggcagacgaggagaccagagataggagataaattcagcagtcgacac
gggcagaaaggtgtgtgtggcctcatcgtccctcaggaggacatgccgttctgtgacact
gggatctgtccagatatcatcatgaatccccacggatatccgtccagaatgacggttgga
aagttgatagagctgcttgctgggaaggcgggggtcctggacggacggtttcactacggg
acggcctttggaggcagcaaagtgaaggatgtgtgtgaggatctgatccgatatggatac
aactaccagggcaaggactacgtcacctcaggaatcaccggagaacctctggaggcgtac
atctacttcggaccggtctactaccagaagctgaagcacatggttctggacaagatgcat
gccagagctcgagggcccagagctgttctcaccaggcagccaaccgagggtcgctccagg
gacggaggtctgcgattgggagagatggagcgtgattgcttgattggctacggagcgagc
atgttgctgctggagcgtctgatgatctccagcgacgccttcgaggtggacgtgtgcgga
cagtgtggcctgctgggatactctggctggtgtcactactgtaagtcttcctgccatgtt
tcgtcgctgaggattccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatccctcgcctcaagctgtcacgctacaacgagtga
DBGET
integrated database retrieval system
