Xenorhabdus nematophila ATCC 19061: XNC1_2696
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Entry
XNC1_2696 CDS
T01274
Symbol
ybjR
Name
(GenBank) putative amidase
KO
K11066
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
XNC1_2696 (ybjR)
Enzymes [BR:
xne01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
XNC1_2696 (ybjR)
Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
Peptidoglycan biosynthesis and degradation
Amidase
XNC1_2696 (ybjR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CBJ90750
UniProt:
D3VIB0
LinkDB
All DBs
Position
complement(2657063..2657896)
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AA seq
277 aa
AA seq
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MIKKLIVCVFTALLIGCSYFPEREDRNNYIVDHSYPYTTNQDIDSVRVLVLHYTALNDKR
SIRALTGGEVSTHYLIPSQPKYEKKEPVIFQLVPENQKAWHAGKSEWNGYQNLNRYSIGI
EIVNCGFKQQFIKKEWCSYHPSQIDAVIRLAKDVIQRYQIKAINVVGHSDIAPLRKEDPG
PFFPWQLLYTQGIGAWPEHMTVNKYLAGRAPDTPASVISIQKALSLYGYSIPQTGILDTA
TRKTIQVFQMHFRPSDISGMPDAETEAIALALIEKYQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaattaatagtatgtgtatttactgctctattgattggttgttcttatttt
cctgagcgggaagatagaaacaattatattgttgatcattcttatccttataccaccaat
caggatattgattcggttagggttcttgttttgcactatactgcactgaatgataaaaga
tccatacgggcattaacgggaggagaagttagtactcattacctcattccttctcagcca
aaatatgaaaagaaagagcctgttatttttcagttagttccagaaaatcagaaggcatgg
catgcgggaaagagtgaatggaatggataccaaaatctaaaccgttactctattgggatt
gaaattgttaattgtggatttaaacagcagtttattaaaaaagaatggtgttcatatcat
ccatcacaaattgatgcggtgatccgtttagcgaaagatgttatccagcgataccagatt
aaggctatcaatgttgttggtcacagtgatatagcaccacttagaaaagaagatcccggc
ccattttttccttggcaattactttatacccaagggattggtgcttggcctgagcatatg
acagttaataaatatttggctggaagagcgcctgatacgcctgcatcagtgatttcaata
cagaaagcactgtccctgtacggttatagcattccccaaacaggcatactggacactgcg
acgcgtaaaacgattcaagtatttcaaatgcattttcgtccatcagatattagtgggatg
cctgatgcggaaacagaagcaattgctttagctttgatcgaaaaataccaataa
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