KEGG   Xenorhabdus nematophila AN6/1: XNC2_0753
Entry
XNC2_0753         CDS       T03752                                 
Symbol
ribD
Name
(GenBank) bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm00740  Riboflavin metabolism
xnm01100  Metabolic pathways
xnm01110  Biosynthesis of secondary metabolites
xnm01240  Biosynthesis of cofactors
xnm02024  Quorum sensing
Module
xnm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XNC2_0753 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XNC2_0753 (ribD)
Enzymes [BR:xnm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XNC2_0753 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XNC2_0753 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CEK21749
LinkDB
Position
I:661122..662231
AA seq 369 aa
MMTLDEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEEIVGEGFHLRAGEPHAEVHALRM
AGEKAKGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGRGLYKLQQA
GIAVEHGLMMDQAESLNKGFLKRMRTGFPYLQLKLGSSLDGRTALSSGESQWITSPQARQ
DVQTLRAQCSAILSSSATVLADDPSMTVRWNELDAETQSVYPEERLRQPIRIITDSQNRV
TPQHQVIQQTGQCWLAYTNKNEQHWPDNVKQILLPAHGGGVDLVLLMMQLGKRQINSVWA
ECGPALAGALLSLGLVDELILYIAPKVLGNSARGLFDIPELHKLSDAPEFTLFDVKQIGP
DIRLRLRPL
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgatgacacttgatgaaatttatatgtcccgtgcgctagagctggcgtatcagggacgt
tttacaacatccccgaatccaaatgtaggctgtgttattgttaaggatgaagaaatagtc
ggggaaggcttccatttacgtgcgggtgagcctcatgcagaagtacatgccctccgtatg
gcgggtgaaaaagccaaaggtgccacagcctacgtcacacttgaaccctgtagccatcac
ggtaaaaccccgccctgtgcagacgctttgattgctgcgggtttaagccgtgttgttgtc
gcgatgcaagatcccaatccacaagttgccgggcgcggtttatataaattgcagcaggca
ggcattgcggttgagcatggtctgatgatggatcaggcagaatccctgaataaaggattt
ctcaaacgtatgcgtacggggttcccttacctacagttgaaactgggatcatcattagat
gggcgtaccgcgttgtcatctggggaaagtcaatggattacctcaccacaggcgcgtcag
gatgtgcagacgttacgggcccaatgcagtgctattttgagttcgagcgcaacggtattg
gctgatgatccctcaatgactgtccgttggaatgaactggatgctgaaacacaatcggtt
tatcctgaagaacggcttcgccaacccatccgcattattactgatagtcaaaatcgtgtc
acaccacaacatcaagttattcagcaaacagggcaatgttggttagcgtacactaacaaa
aatgaacaacattggcctgataatgttaagcagattttattgccggcacatggtggtggt
gttgatttggttctgctgatgatgcaactgggcaaacgtcaaattaattcagtctgggca
gaatgtggccctgctctggcgggtgctttattgtctctggggctggtggatgaattgatc
ctgtatatcgcccctaaggtgctgggaaacagtgcccgtgggttgttcgatattcctgaa
ttgcacaaactatcggatgcacctgaattcacgttgtttgatgtcaagcaaattgggcct
gatatacgtcttcgcttacgtccactctag

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