Xenorhabdus nematophila AN6/1: XNC2_1549
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Entry
XNC2_1549 CDS
T03752
Symbol
ycbY
Name
(GenBank) putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xnm03009
]
XNC2_1549 (ycbY)
Enzymes [BR:
xnm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
XNC2_1549 (ycbY)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
XNC2_1549 (ycbY)
Ribosome biogenesis [BR:
xnm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XNC2_1549 (ycbY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
THUMP
Cons_hypoth95
Methyltransf_31
Methyltransf_25
Methyltransf_11
MTS
Methyltransf_15
N6_Mtase
Methyltransf_3
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
CEK22543
LinkDB
All DBs
Position
I:1485644..1487776
Genome browser
AA seq
710 aa
AA seq
DB search
MNSLFASTARGLEELLKNELEMLGAQSCKIAQGGVHFQGDDRVMYKSLLWSRLASRIMMP
LNEFKVYSDLDLYLGVQAIDWSEIFSVNSTFSVHFSGTNEEIRNTQYGALKVKDAIVDSF
VRKIKQRPDVAKQQPDVRVNVFLHKEKATVSLDLSGDSLHMRGYRDLAGQAPLKETLAAA
IIMRSGWSAGTPIVDPMCGSGTLLIEAAMMATDCAPGLHRQYWGFTSWLKFDETLWREVT
IEAQVRFRKGLQETTSRFFGTDIDRRVMDMARSNARRAGVAQLIQFQQGDASKLENPLPE
GVVGTVLSNPPYGERLESEPALIALHSIFGRVIKNRFPGWRLSLFSASPELLSCLQLRAE
REFKAKNGPLNCVQKNYSIQSAQISDSTKPLDTGIAEDYANRLRKNEKKLSKWAKQQGID
CYRLYDADLPEYNVAVDRYADKIVVQEYAPPKSVDANKARQRLFDVISATMNVLGLTSNQ
LILKTRQRQKGKSQYEKMAEKQEFFLVNEYGAKFWVNLTDYLDTGLFLDHRLARKKLGEM
SQGKDFLNLFAYTGSATVHAGLGGARSTTTVDLSRTYLEWAEKNLQVNGLTGRQHRLIQA
DCLGWLAQTREQFDVIFIDPPTFSNSKRMEDTFDVQRDHIALMKQLKRLLRGSGTLMFSN
NKRGFKMDFVELEKLGLVAEEVTAKTLSQDFTRNRQIHNCWLIRHAGEEK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctctttgccagcacggcacgtggactggaagaactgttaaagaacgaactg
gaaatgctgggagcgcaatcctgtaagattgcccagggtggggttcattttcagggcgat
gaccgggtaatgtataaaagtctgctgtggagtaggctggcatcccgtatcatgatgccg
ctcaacgaatttaaagtttatagcgatctggatttatatcttggtgtccaagcgattgac
tggagtgagatcttctcggtcaacagcacgttctccgtgcatttcagcggcacaaatgag
gagatcaggaatacccaatatggcgcgctgaaagtaaaagatgccatagttgacagcttt
gtacgtaaaatcaaacagcgtcctgatgttgctaagcaacaaccagatgtccgtgtgaat
gtcttcttacacaaagaaaaagcgactgtttcacttgatctgagtggtgatagcctgcat
atgcgtggctaccgtgatctggcaggacaagctcccctgaaagaaaccctggcagcagcc
attattatgcgttctggctggagtgcaggtacgccaatagtcgatcctatgtgtggttca
gggacgctattaatagaagcagcaatgatggcgacagattgtgcccctggtttgcatcgt
cagtattggggatttacatcatggctaaaatttgatgaaactctctggcgtgaagtgact
attgaagcacaagtgcgtttccgtaaagggttacaggaaacgacttcccgctttttcggc
acggatattgatcgtcgggtaatggatatggcgcgttcaaatgcgcgcagagcgggggtc
gctcaattgatccagttccagcagggagatgcaagtaaactggaaaatccactgccggaa
ggcgtggtgggaaccgtattgagcaacccaccttatggtgagcgccttgaaagtgaaccg
gcattaatagcgttacacagtatattcggtcgtgtgatcaagaaccgcttcccgggctgg
cgtttgtcattattcagtgcttcaccagaattgttgagttgcctgcaattacgtgcggag
cgtgaatttaaggcaaagaatggtccactgaattgtgtccagaaaaactattccatccaa
tctgcccagatatctgatagtactaaaccgctggatacaggtatcgcggaagattacgca
aaccgcttgcgcaagaatgagaaaaaactcagtaaatgggccaagcagcaaggtattgat
tgttatcggttatatgatgcggatttaccggaatacaatgttgccgttgatcgttatgcg
gataaaatcgtcgttcaggaatatgcgccaccaaaatccgtggatgccaataaagcccgc
caacgtttgtttgatgttatcagtgccacaatgaatgtacttggtttaacatccaaccaa
ctgattttgaaaacccgccagcgtcagaaaggcaaaagccaatatgagaaaatggctgag
aaacaagagttctttttggtaaacgagtacggcgcgaaattctgggttaacctgactgat
tatctggatacaggtctgttccttgatcatcgtcttgcccgtaagaaattgggggaaatg
agccaaggcaaggatttcctgaacttatttgcttataccggttcggcaactgttcatgcg
ggattgggtggcgcgcgctcgacaacgacagtggatctgtccagaacttatcttgaatgg
gcagagaaaaatttgcaggtaaatggcttaacgggtcgtcagcaccgtttgattcaggct
gattgtttgggatggttggcgcagacccgtgaacaattcgatgtaatttttatcgatcca
ccgacattttccaactccaagcgaatggaagacacttttgatgtccagcgtgatcatatt
gcactaatgaaacaattgaaacgtttgttacgcggtagcggaaccttgatgttttccaac
aacaagcgcggcttcaagatggattttgttgaattagagaaattagggctagttgctgaa
gaagtaaccgcaaaaacattatctcaggatttcacacgtaaccgccagattcataactgc
tggttgattcgtcacgctggcgaggaaaaataa
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