Xenorhabdus nematophila AN6/1: XNC2_2740
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Entry
XNC2_2740 CDS
T03752
Symbol
menD
Name
(GenBank) bifunctional: 2-oxoglutarate decarboxylase; SHCHC synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm00130
Ubiquinone and other terpenoid-quinone biosynthesis
xnm01100
Metabolic pathways
xnm01110
Biosynthesis of secondary metabolites
xnm01240
Biosynthesis of cofactors
Module
xnm_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
XNC2_2740 (menD)
Enzymes [BR:
xnm01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
XNC2_2740 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
CEK23734
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Position
I:2850298..2851995
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AA seq
565 aa
AA seq
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MSNCALNRRWAELLLEALTRYGLRHVCIAPGSRSTPLTLSAAENQKLICHTHFDERGLGH
LALGLAKAGKEPVAVIVTSGTAVANLYPSLIEAGLTGERLVFLTADRPPELIDCGANQAI
RQTGIFASHPSQTLALPRPTPDIAASWLISAIDNGMSNLKQGALHINCPFAEPLYGNDVM
AYQDWQQTLGEWWQGNEPWLIQPEIHIIAKAEDWDLWRQKRGIVLAGRMDAEEGKLVARW
AKEMGWPLIGDVLSQTGQPLPNADLWLNHPRVQDILSQGQLVIQFGAGLTGKRVLQWQEK
CQPEQYWIVDPIIGRLDPANHRGRKFTCCVADWLREHPAHLTPAHSSYSQSSWADELAIW
AKKASECVATTLAGKFSEAAVAYQLHQLLPEQGQLFVGNSLIVRLIDALGQLPAGYPVYS
NRGTSGIDGLIATAAGVQRATNKPTLAIIGDISALYDLNSLALLRHLSTPLLLIVVNNNG
GQIFSLLPTPQEERQHFYCMPQDVSFDHAAAMFGLNYAAPRTWTELKQCAEQVWKCQETT
LIELKVAGSDGAVCLQELQKQVAML
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattgcgcactgaaccgccgttgggcggaacttttattggaagcactgactcgc
tatggattgcgccatgtttgtattgccccgggttcccgttcaacacctttaaccttgtct
gccgcagaaaaccaaaaacttatttgtcatactcactttgatgaacgaggtttgggacac
ttggctttggggctggcaaaagcgggtaaagaacccgtggcagtgattgtgacatcggga
acggcagttgccaatttgtacccttctttaattgaagccgggttaaccggggagaggttg
gtttttcttactgccgatagaccgccagaattaattgattgtggtgcaaaccaggcgatt
cgccagacaggtatttttgcttcccatccttcccaaacgttggcattgccgcgcccaact
ccagatattgctgcaagttggttgatttctgctattgataatggcatgtcaaatctgaaa
caaggcgcactgcatattaattgcccgtttgctgagcctttatatggcaatgatgtgatg
gcatatcaagattggcagcagacattaggggaatggtggcagggaaatgaaccgtggctg
attcaacctgaaatccatatcatcgccaaggccgaagattgggatctctggcggcaaaaa
cgaggaatcgttctggctggaagaatggatgctgaagaaggaaaactcgttgcccgatgg
gcaaaagaaatgggctggccattgatcggggatgtgctgtcccaaacgggacagcctttg
ccgaatgctgatttatggcttaatcacccccgcgttcaggatattttatcccaagggcaa
ttggtcattcaatttggcgcgggcctgacaggaaaacgcgtgttgcaatggcaggaaaaa
tgtcaaccagagcaatactggattgttgatccgatcatcggcaggcttgatcccgcaaat
caccggggacgcaaatttacttgctgtgtagcggattggttacgggaacatcctgcccat
cttacaccagctcattcttcatattctcaatcatcttgggccgatgaattggcaatatgg
gctaaaaaagcatcagaatgtgttgcaacaacactggcaggaaaattcagtgaagccgcc
gtagcatatcagttacatcagttgttgccggagcaaggtcaattgtttgtcggcaatagc
ttgattgtgcgcctgattgacgctttaggacaacttcctgctggctatccggtttacagc
aaccgtggaaccagtggaattgatggattaatagcaaccgctgctggcgtacagcgggca
acgaataagccgacgctggcaattatcggtgatatttcagcactctatgatttgaacagt
ctggccttgttacgtcatctttccacaccattactgttgattgttgtcaataataatggc
ggtcagattttttcattattgccgacaccacaggaagaacggcaacacttctattgtatg
ccacaagatgtcagttttgatcatgctgctgctatgtttggcctgaattatgccgctccc
cgaacttggacagaattaaaacaatgcgctgagcaagtgtggaaatgtcaggaaacaaca
ctgattgaattgaaagttgccgggagtgatggggcagtatgcctgcaagagttacagaaa
caggtagctatgctgtga
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