Xanthomonas oryzae pv. oryzae PXO99A: PXO_03934
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Entry
PXO_03934 CDS
T00763
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03030
DNA replication
xop03410
Base excision repair
xop03420
Nucleotide excision repair
xop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXO_03934
03410 Base excision repair
PXO_03934
03420 Nucleotide excision repair
PXO_03934
03440 Homologous recombination
PXO_03934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xop03032
]
PXO_03934
03400 DNA repair and recombination proteins [BR:
xop03400
]
PXO_03934
Enzymes [BR:
xop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXO_03934
DNA replication proteins [BR:
xop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PXO_03934
DNA repair and recombination proteins [BR:
xop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PXO_03934
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXO_03934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
ACD57211
UniProt:
A0A0K0GGE7
LinkDB
All DBs
Position
572796..575597
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDALYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KIDVTLASGPRALDLREPNTETLAVLYARYGFTQALRELGGALAQSGLLSEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPALSAPGAYETILTQEQLDSWIAQLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGKAAYLPFGHNFPGAPVQLDRTHALAQLAPLLTDPAVR
KVGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLDDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEDALEAIADQHELPRVILEYRGLSKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMA
HLSGDPGLVGAFASGTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADVDFVDT
LLSEVTTRMASAAELRVPLVVDSGVGDDWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgaacccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgtccggcctacatcgccttcgtggtggatgcacccggc
aagaccttccgtgacgccttgtatgccgactacaaggccaaccggccgtcgatgcccgac
gacctgcgcgcgcaggtacagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcaggccgct
gccgatgggttgagcgtgaccatctccaccggcgacaaggactttgcccagctggtgcgc
ccgggtatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaaatgcggtcccaagactgccgccaaatggctt
gccgaatacgattcgctggacggcgtgatcgccaatgccgacaagatcaagggtaagatc
ggcgacaacctgcgcgctgcgttgccacgcctgccgctcaaccgtgagctggtcacgatc
aagatcgatgtgaccctggccagcggcccgcgcgcgctggatctgcgcgaacccaacacc
gaaacgctagcggtactgtacgcgcgctacgggtttacccaggcgctgcgcgagctgggc
ggtgcgctggcgcagtccggtctgttgtccgagccggtggcgctgggcgctgccgctgct
accgcgcgcaccgagccgggccgtgcgcgcggcaccggcttcgtgtccgggccggtcaat
gcagcggtggacctggatccagcgctgtcggcgcctggcgcgtacgagaccatcctgacc
caggagcagttggacagctggatcgcgcagctgcgcgccgccggccagttcgctttcgat
accgaaaccgacagcctggacccgctgcaggccgacctgatcggcctgagcgtggccgcc
gagccaggtaaggcggcgtatctgccgttcggccacaactttcccggcgccccggttcag
ctcgaccgcacccatgcgctggcgcaactggcgccgctgctcaccgacccggccgtgcgc
aaagtcggccaacacggcaagtacgacctgcacgtgatgcgccggcatggcgtggagctt
gccggctacgccgacgacacactgctggagagcttcgtgctcaattccggcagcgcccgt
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtttgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggacgatgccacc
cgctacgccgccgaagacgccgacatcaccctgcgcctgcatcacgtgctcggccccaag
ctggcagccgagcccggcctggagcgcgtctaccgcgacatcgaaatgccactggtggac
gtgctggcgcgcatcgaagccaacggcgtgtgcgtggacgccgccgaactacgccgtcag
agcgcggacctgtccaagcgcatgctcgccgcccagcaaaaagccaccgagctggcaggg
cgcaccttcaacctggattcgcccaagcagctgcaggcgctgttgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagacgcgctggaa
gccatcgccgaccagcacgagctgccgcgggtgatcctggaataccgcggcctgagcaag
ctgcgcagtacctacaccgacaagctgccggagatgatccacccgcagtccggacgcgtg
cacaccagctaccaccaggccggcgccgccaccggtcggctgtcttcatcggacccgaac
ctgcagaacatcccgatccgcaccgaagacggccgccgcatccgccgcgctttcgtcgcc
ccgcccgggcgcaagctgatcgcctgcgactactcgcagatcgagctgcgcatcatggcc
cacctgtccggcgaccccggcctggtcggcgcgttcgcgtccggcaccgacgtgcaccgc
gccactgccgccgaagtattcggccgcaccatcgacaccgtcagcggtgacgagcgccgc
gctgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggtctggcccgc
cagctcggcatcggccgtggcgaagcgcaggactacatcgcgctgtacttcagccgctat
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaaccgtgttcggccgccgcctgtatctggatttcatcaatgccggcagccagggccag
cgtgcaggcgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgccgacatc
atcaagcgcgccatggtcaaggtggacggctggatcgccgaccacgcgcaacgcgccaaa
atgatcctgcaggtgcacgacgaactggtgttcgaagccgatgtcgatttcgtcgacaca
ctgctcagcgaagtcaccacgcgcatggcctccgcagctgaattgcgcgtgccgttggtg
gtggattcgggcgtgggcgatgactgggatcaggcgcactga
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