Xanthomonas oryzae pv. oryzae PXO86: AZ54_07470
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Entry
AZ54_07470 CDS
T03765
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xoy03009
]
AZ54_07470 (rimO)
Enzymes [BR:
xoy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AZ54_07470 (rimO)
Ribosome biogenesis [BR:
xoy03009
]
Prokaryotic type
ribosomal protein modification factors
AZ54_07470 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AJQ82481
LinkDB
All DBs
Position
1515184..1516584
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AA seq
466 aa
AA seq
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MKSIDYVNPVKNQVPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTC
GFIDSAVTESLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAV
HAALPPRHDPFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEV
LCEAERLVRGGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTR
LHYVYPYPHVDDVLPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLQRVQRWKAM
CPEITVRSTFIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGASANALPDPVPEE
VKQERLARFMAKQAEISALRLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQN
GGELGLKVGDLVDVEITDSDEHDLFGDALPANVVPQQGRALNLQMV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatagattacgtgaatccagtgaagaatcaagtgcccaaagttggcttcgtg
tcactaggttgtccgaaggcgctcgtcgattccgaacgcatcctcacccagctgcgcgtg
gagggctacgacatcgtgcccagttacgacgctgccgacgtggtggtggtcaacacctgc
ggcttcatcgattcggcagtgaccgagtcgctggacgcgatcggcgaggcgatgaacgcc
aacggcaaggtcatcgtcaccggctgcctgggcaagcgcccggagcagattcgtgaggcg
tacccgcaggtgctggcggtgtccggcccgcaggactaccagagcgtgatggaggcggtg
cacgccgctttgccgccgcgtcacgaccccttcgtggatctggtgccggactacggcatc
aagctgaccccgcgccattacgcgtatctcaagatttccgaaggctgcaatcaccgctgc
agcttctgcatcattccctcgatgcgcggcgatctcgtctcccgtccggtcgatgaggtg
ctgtgcgaagccgagcggttggtgcgcggtggcgtcaaggaattgctggtggtgtcgcag
gacacctctgcctacggcgttgacctgaagtacgccgagcgcccgtggcgcgaccgcatg
taccagacccgcatgaaggcgctgtgcgagggcttgtcggagctgggcgtgtggacgcgc
ctgcattacgtgtacccgtatccgcacgtggacgatgtgcttccgctgatggccgaaggc
aagctgctgccgtatctggacatcccgttccagcacgccagcccgcgcatcctcaagttg
atgaaacgtcccggtgcagtggaaaagaccctgcagcgcgtgcagcgctggaaggcgatg
tgcccggagatcaccgtgcgttcgaccttcattgtcggtttccccggcgaaaccgatgcc
gagttcgaatctttgctggacttcctggatcaggcgcaactggaccgcgtcggtgcgttc
gcgtactcgccggtcgatggcgccagcgccaatgcactgccggacccggtgccggaagaa
gtgaagcaggagcgcctggcgcgcttcatggccaaacaggcggagatttctgcgttgcgg
cttgaggcaaagatcggcagcgtgcagcagtgccttgttgatctgatcgaagacgacatc
gccgtggcgcgctcacgcgccgatgcgccggagatcgatggcctggtgcatatccagaac
ggcggcgagctcgggttgaaggtgggcgatctggtcgatgtggaaatcaccgacagcgac
gagcacgatctgttcggcgatgcgctgccggcgaacgtcgtaccccagcaagggcgcgcg
ttgaatctgcagatggtgtaa
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