KEGG   Xenopus tropicalis (tropical clawed frog): 100145368
Entry
100145368         CDS       T01011                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100145368 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100145368 (polr1e)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     100145368 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 100145368
NCBI-ProteinID: NP_001120306
Xenbase: XB-GENE-1003651
UniProt: B1H209
LinkDB
Position
1:complement(109077413..109094911)
AA seq 419 aa
MASRATWEYHGAPQHGKGALVVQFSNGTIQSPESVNFTLYSNKDDNNPKAKRQRILAAET
DRLSYVANNFTSDAVKSNSLCRYFVGVLNKETGKMEVYDSEQYRMQPILESNKEKELHTE
DVMDQPSKSYREKVDALIESFGTNKQKRALSSRKLNQVGSEILNKAMAKAAEEIIESRGT
KELVKDAVDKKQQETSLFLPPCDYNANKPENAYKFDDLISPVEYAALETASAAFRNMTSE
DLLQMVENKKSGLFVLQELQGLREIKDEKALDHQARCLWYLDALIKLSQLRTVKRKDIMT
PECPGIICGKLMKNFTVEVFKNGRIQNSISGTTKTKIVAYVIAIALHISDFQVDLTLLQS
DMKLQESRILEIAKAMGLKIAKRTMYSESLIEEGHKIGMLTIPLTVYKPSGGELKRKKM
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcttctagagctacatgggaatatcatggcgccccacaacatggcaagggagcttta
gtagtacagttttccaatggaactatccagtcccctgaaagtgtgaatttcactttatac
agcaacaaagatgacaacaatcctaaggcaaaaagacagaggattctggctgcggaaact
gacagactgagttatgtagctaataattttacctccgatgcagtaaagagcaattcactg
tgtaggtactttgttggagtgctcaacaaagagactggaaagatggaggtatatgattct
gaacagtacaggatgcagcccattttggaaagcaacaaggaaaaggaattgcacactgaa
gatgtaatggaccagccgagcaaaagttatcgggaaaaggtcgatgcccttatagaatca
tttggtaccaacaagcagaagcgagctttgagttctcgaaaactgaaccaagttggcagt
gaaattttaaataaagctatggctaaagctgctgaagaaatcatagaaagccgaggcaca
aaagagctggtaaaagatgcagtagacaaaaaacaacaagagacttcactgttcctgcct
ccatgtgattataatgcaaacaaaccagaaaatgcttacaagtttgatgaccttatctct
cctgtggagtatgctgctcttgaaaccgcttctgcagctttcagaaatatgacatcagag
gatctcctgcagatggtagaaaataaaaagagtggtttatttgtgcttcaagaacttcaa
gggcttcgtgaaattaaagatgagaaagctcttgatcatcaggctcgctgcttgtggtat
ctggatgctttgataaaacttagccaactccggacagttaaacgaaaagatattatgact
cctgaatgcccaggcatcatatgtgggaaactcatgaaaaatttcacagttgaagttttt
aagaatggcaggatacagaattccatttctggcacaacgaaaactaaaatagttgcttat
gtcatagctatagcattgcatatctctgactttcaagttgatctgactcttttacagagt
gacatgaagctacaggaaagcaggattctggaaattgccaaagccatgggtttgaaaata
gccaaaagaacaatgtattccgaatctttaattgaagaaggtcacaaaattggaatgctt
actatccctctgactgtctataagccatctgggggagagttaaaacgaaagaaaatgtaa

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