Xenopus tropicalis (tropical clawed frog): 100379802
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Entry
100379802 CDS
T01011
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020
RNA polymerase
xtr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100379802 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100379802 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100379802 (polr1c)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100379802 (polr1c)
RNA polymerase I system
RNA polymerase I
100379802 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
100379802
NCBI-ProteinID:
XP_031757702
Xenbase:
XB-GENE-1009901
UniProt:
A0A8J1JIK9
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All DBs
Position
5:complement(2576939..2588547)
Genome browser
AA seq
363 aa
AA seq
DB search
MLCLHVWLLGERESGMAVPGSVQEMRERVVLGEFGIRNVHTTDFPGNYMGYNDTWNYGRF
ENNFRIDIVKMEGDTLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVYVYNNTSIIQDEI
LAHRLGLIPIRVDPRLFEYRSAAEEGEGTEIDTLQFELNVKCTRNPRASKDCSDPNELYL
NHKVYTSHMKWLPQGNQSDLFPETDPPRPVHGDILIAQLRPGQEISVIMHCVKGIGKDHA
KFSPVATASYRLLPEITLLCPIEGELADRLQRCFSPGVIGVDEVDGKRVARVINARTDTC
GREIFRHDDLKDLVRMARVRDYYIFSVESTGILPPDILVSEAIKVLMGKCRRFLDELDTS
QMD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtctacacgtgtggctcctgggagagagagagagcggcatggcggttccgggt
tcggtgcaagaaatgcgggagcgagtggtgctcggggagttcgggatccgcaatgttcac
accacagacttccctgggaactacatgggctacaacgacacatggaactatgggagattt
gagaacaacttccgcatagacatagtgaagatggaaggggacaccctggagttcgacatg
gttggaatcgacgcggccatcgcaaacgcattcaggcgaattctcctggcagaggtaccg
accatggcggtggagaaggtctatgtctataacaacacgtctatcatccaggacgagatt
ctggcacatcggctgggcctcatccccatcagggtggatccgcggctgtttgagtatcga
agtgcggcagaggagggcgagggcacagagatagacaccctacagtttgagctgaacgtc
aagtgcaccaggaaccccagagcctccaaggattgttccgacccaaatgagctctacctg
aaccataaagtttacaccagtcacatgaagtggctcccacagggcaaccagtccgacctg
ttcccagagactgacccccctcggcccgtccatggcgacattctgattgcgcagctgcgc
cccgggcaggagatcagcgttatcatgcactgcgtgaagggcatcgggaaagaccacgcc
aagttctctcccgtggccacggccagttaccggctgctgcccgagatcaccctgttgtgc
cccatcgagggggagctggcggatcgactgcagcgctgcttctctccgggggtcatcggc
gtcgatgaggtggacgggaagagagtggccagggtaataaacgcacggacggacacctgc
gggcgggaaatcttccgccatgatgatctgaaggacctggtgcgaatggcgcgcgtgcga
gactattacatcttctcagtagaatccacagggatcctgccccccgatatcctggtgagt
gaagccatcaaggttctgatgggcaaatgccggcggttcttggacgagctggacacatcg
cagatggactga
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integrated database retrieval system
