Xenopus tropicalis (tropical clawed frog): 100485566
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Entry
100485566 CDS
T01011
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X2
KO
K06243
laminin, beta 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100485566 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100485566 (lamb2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
100485566
NCBI-ProteinID:
XP_002933101
Xenbase:
XB-GENE-5935962
UniProt:
A0A6I8R9J4
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All DBs
Position
4:complement(137507567..137574247)
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AA seq
1783 aa
AA seq
DB search
MAPSLWPFGIVITALVTGSLSQIPDQQHGCSQGSCYPATGDLLVGRADKLKATSTCGLRR
AQPYCIVSHLQDEKKCFVCDSRKPYNPLYNPISHRIENVITTFAPHRKKAWWQSENGVSA
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQAYRYFGHDCASSFPNVSRS
ALRKVDEVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYGPNIQNLLKITNLRINFTKL
HTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIQGVSRDVEGMVHGRCVC
KHNTKGLNCEQCDSSFNDLPWRPAEGRSTNACKKCNCNNHSRKCHFDMAVYLSTGNVSGG
VCDDCVHNTMGRNCELCKPFFYKDPSKDLRDSAVCKACDCDPDGSLDGGLCDSLDNPALG
LIAGQCRCKDYVEGPRCDRCKTGFFGLSTNNFQGCQRCQCDPRGTISDGAQCDPISGDCF
CKRFVTGRTCNQCLPEFWALSHDLHGCRSCDCDIGGAWDNHCATETGQCRCRSHMVGRQC
NQVKSGYYRIHLDHYTYEAESALHRQGCSVLERERLIGRPATWTGPGFALVPEGGILEFQ
ISNIPYSMEYDVIIRYEPQLPATWEQVKISVIRPGPIPTSSPCGNTIPADDLMVASLPPG
TRHVVLPQPVCLERGVSYTIRLEFSRYSLREKIPSANILIDSLVLVPRYSSMEMFIAGDP
ASIQRKETFERYRCHSNSGNVIKSSTTEVCSGLITSMSAIIHEGALPCSCDPQGSLSSEC
DPNGGQCQCKANVIGQRCDRCAPGTHGFGPTGCKACECNMEGSTHNFCDQRTGQCPCRPG
AFGSRCDRCQPGHWGFPNCRQCQCNGHSEECDQRTGACLNCRDHSTGDRCERCTAGFYGN
PILGSGDHCRPCPCPEGPNSGRHYAASCHQDPRSRQVICNCKQGYTGPRCEECSPGFFGN
PFQTGGRCLLCQCNNNIDMTDIGGCDRRSGQCLKCKYNTEGRFCEHCRIGFYGDASRRNC
RKCTCNYLGTEPSQCPSREDCMCDRTSGQCLCLPNVRGQNCDRCSPHFWNLASGKGCQPC
NCDPNHSFSLSCNEFTGKCQCRPGFGGLTCTDCQENYWGNPNIQCRACDCDRRGIKAPQC
NRASGHCDCRAGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRIVQDLATRTKSLVQRG
KDIQQSGVAGVYQKNFREIEKKLAKAQGIVNARNATAESVTKLMKIMDDLRNKINESTEA
LTQLEGELTAVQDENFDANHDLAELERDARSLNMTAKERSHQLDVLKNSNFLGAYDSIQQ
SHAKSRQAEKQANNATTNVPSPVSDSARTREKTQQLITHKRDDFNRKNAANRRALNDLAA
KTDTLDMKKINEKVCGAPGDAPCSESPCGGAGCRDDEGKRHCGGLNCNGAVATADNALGR
ARHAEEELQKALGEVEVLFQKVAEAKVKADRAKQRAQATLDRANETKARVEQSNKELREL
IQQIKDFLNQEGADPDSIEMVASRVLDLTIPATPKQIQRLAEEIKDRVKTLANVDAILDQ
TAADVRKAEQLLHEAKRAKNRAENVKNTAESVKRALDDARRAQNAAEGAIQSANDDIKDT
ERKLTAIQTATSSAENQLNDAMDRVGNLDKQIDGLKMKRANNSLAASRAEESATAALDKA
NDAKKILEGQLADKYKTVQNVVDRKAKNIKEAKTKADQLQDEAKKLLENAQDKLKRLQDL
EVEYTKNEKLLQDKAKRLNGLEDKMKEILHAINQQIQIYNTCQ
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccttgtggccatttggcattgtgataactgccttggtcacaggatccctt
tcccagattcctgaccagcaacatggatgttctcaaggtagctgctaccctgccactgga
gacttgctggtgggccgagccgataagctcaaagctacatctacctgtggccttcggaga
gctcagccatactgtatagtcagccatttgcaggatgaaaagaaatgcttcgtctgcgac
tctcgcaagccctacaatcccctgtataaccccatcagccaccgcattgaaaacgttatt
acaacctttgctcctcatcgaaaaaaggcttggtggcagtctgaaaatggtgtttccgca
gtcactattcagctagatttggaggctgaatttcacttcacccacctgatcatgaccttc
aagaccttcaggccggcggccatgctggtggaacgctctgcagactttggccgtacctgg
caggcttaccgttactttggacacgactgtgcctcctccttcccaaacgtgtcccgcagt
gccctgaggaaggtggatgaagttatctgtgaatcccgttactctgacattgagccctct
acggaaggggaggtcatttacagagttttggatccagctatcccgatccgagacccatat
ggcccaaatattcagaatctcttgaagatcaccaacctcagaatcaactttaccaagctg
cacacattgggcgacaaccttctggattcccgagtggagatcaaagagaagtattactat
gccctttacgagctggtggtacgagggaactgcttctgttatggccatgcatctgaatgc
gcgcccatccaaggagtgtccagagatgtcgagggcatggtgcatggaagatgtgtgtgc
aaacacaataccaaggggctcaattgtgagcaatgtgatagttcctttaatgatcttcct
tggagaccagcagaaggacgcagcaccaacgcctgtaaaaagtgcaactgcaacaatcac
tctcgcaagtgtcactttgacatggccgtgtacttgtctactggaaatgtgagcggtggg
gtatgtgacgactgtgtgcacaacaccatgggccgtaactgtgaactgtgcaagccgttc
ttctacaaggatccaagcaaggatttacgggacagtgcagtctgcaaagcctgtgactgt
gacccagacgggtcgttggacggaggcctgtgtgactccctggataacccagctttgggt
ctcattgctggacagtgccgctgcaaagattatgtcgaaggcccaagatgtgatcgatgc
aagactggattctttggcctgagtacaaataactttcagggctgccaaaggtgccagtgt
gacccaagaggtaccatctcggacggtgctcagtgtgacccaatcagtggcgactgtttc
tgcaaacgctttgtgactggccgaacatgcaaccaatgcctgcctgaattttgggccctc
agccatgacctccatgggtgcagatcctgtgactgtgacattggcggtgcctgggataac
cactgtgctacggagacaggccagtgtcgatgccgcagccatatggttggcaggcaatgt
aaccaggtgaaatctggctactaccgcatacacctggatcactacacgtacgaggccgaa
tctgctttgcaccgacagggttgttcagtgttggagagggaacgtctgatcggtcgccca
gccacatggactggtcctggatttgccctggtcccagagggaggaattctagagttccag
atcagcaatattccttattctatggaatatgatgtcatcatacgttatgaaccccagctt
ccagcaacttgggaacaagtcaaaatatccgtgattagaccgggtcctatcccaacgagt
agcccatgtggtaataccatcccagctgatgatctgatggtggcatctctaccccctggc
acaaggcatgtagtcctgcctcagccggtttgtctggaacgtggggtcagttatactatt
cgactggagttcagcagatacagtttgagagaaaagatacctagtgccaacatattgatt
gattcgctagtgctggttcctagatactcctccatggaaatgttcattgccggagaccct
gcatctatacaacgcaaggagacttttgagcgttatcgctgccatagcaacagtggaaat
gtaataaagtcatctaccaccgaggtgtgctctggtctcatcacaagcatgtcggctata
attcatgaaggagcactgccctgtagctgtgacccacagggatctctgagctcagaatgt
gaccccaatggtgggcagtgccagtgtaaagctaatgtcattgggcagcgctgtgatcgc
tgtgcaccaggaacacatggatttggaccaacaggatgcaaagcctgtgaatgtaatatg
gagggatccactcacaatttctgtgatcagcgcaccggtcagtgtccttgtcggccaggg
gcatttggctccaggtgcgaccgctgccagcctggccactggggcttcccaaactgccgg
cagtgtcagtgcaatggtcattcagaagagtgcgaccagagaacaggggcatgtctgaac
tgccgagaccacagcaccggagacagatgtgagagatgcactgcaggcttttatggaaac
ccaattctgggctcaggggaccactgccgtccctgcccctgccctgaggggcccaacagt
gggcgacactatgcagcatcctgtcatcaagacccccgttccagacaagtcatctgcaac
tgcaaacaggggtacacggggcctcgctgtgaagaatgttctccagggttctttggaaat
ccattccagactgggggacgctgccttctttgccagtgtaataataacattgatatgaca
gatattgggggttgtgaccgccgcagtggccagtgcctcaaatgcaagtacaacaccgaa
gggaggttctgtgagcactgtcgaattggcttttatggggatgcatcaaggcgcaactgc
agaaaatgtacatgtaactaccttgggacagaaccaagccagtgtccatcacgggaagac
tgcatgtgtgacagaacaagcggacagtgcctttgcttaccaaacgtcaggggtcagaac
tgcgaccgttgcagtccacacttttggaacctggcaagcggcaagggctgtcagccatgt
aactgtgaccccaaccattccttcagcctatcctgcaatgagtttacaggaaaatgtcaa
tgccggcctggattcggtggcctgacctgtacggattgccaggaaaattattggggaaat
cccaatattcaatgcagggcttgtgattgtgatcgccgtggcatcaaggcaccacagtgt
aatagagcctcgggtcattgtgactgccgggctggagtgtcaggagtgcgttgtgaccag
tgtgcccggggattttctgggcagtttcctgattgccagccctgtcatcagtgttttggt
gactgggaccgtatagttcaagacctggccactcgtaccaagagcctagttcaaaggggc
aaggacatccagcagagtggggtagccggagtgtaccaaaagaacttccgtgagatcgag
aagaagcttgccaaggctcaaggcattgtcaatgcccgcaatgccactgcggaatcagtg
actaaactaatgaagattatggatgacttgcggaataaaattaacgagtcaacagaggct
ctcacgcagttagagggcgaactgacagctgtgcaggatgagaactttgatgccaaccat
gatctggccgagttggaaagggatgctaggagtttaaacatgactgccaaggagaggtcc
catcagctggatgtcttgaagaactcaaactttttgggtgcatatgacagcatccaacaa
tctcatgcaaagtcaagacaagccgaaaaacaagccaataatgccaccaccaatgttccc
agtcctgttagtgactcagctaggaccagggagaagacccagcagctgataacacacaag
cgggatgactttaataggaagaatgcagctaatcgtcgggcacttaatgatctggcagct
aaaacagacacccttgacatgaaaaagatcaatgagaaggtctgtggggctccaggagat
gccccatgctctgagagtccctgcggtggagctggttgtcgtgatgatgaagggaagagg
cactgtggtgggttgaactgtaatggagccgtggctactgctgacaatgctttgggacga
gcacgccatgctgaagaagaacttcagaaagcactaggagaagtagaagtgcttttccaa
aaggtggctgaagcaaaggtaaaggcagacagagcaaaacagagggcacaagccaccctc
gacagggcaaatgaaacaaaggcaagggtggaacagtccaataaggagctgcgggaactc
atccagcaaatcaaggactttctgaaccaggaaggtgcagacccagacagcattgagatg
gtggcaagtcgtgtcttggatctcacaatccctgcaaccccaaagcaaatccagcgtctt
gctgaggaaatcaaggacagagtgaaaacacttgcaaacgtggatgccattctggaccaa
accgctgctgatgtgcgcaaagcagagcaactgctgcatgaagccaaaagagccaagaac
cgagccgagaatgtaaagaacacagccgagtctgtgaaaagggccctggatgatgctagg
agagctcagaatgctgctgaaggagctatccaaagcgccaatgatgacatcaaagacacg
gagaggaaattaacagcaattcagacagcaacatctagtgcagagaatcagcttaatgat
gctatggatcgagtaggaaatctggataaacaaattgacggtctgaaaatgaaaagggcc
aacaacagcttggctgccagccgtgcagaagaatctgccactgcagcactggataaagca
aatgatgccaagaagatcttagaaggacaactggcagacaaatacaaaactgttcagaat
gttgttgatcgaaaagctaagaacattaaagaggcgaagacaaaagcggaccaacttcaa
gatgaggcaaagaaactcttagagaatgcacaggataaattaaagaggttgcaagatctg
gaagttgaatatacgaagaacgagaaacttcttcaggacaaagcgaaacgtcttaatggc
ctagaagacaagatgaaggaaattttacacgcaattaaccaacaaattcagatttataac
acctgccagtag
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integrated database retrieval system
