Xenopus tropicalis (tropical clawed frog): 100488695
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Entry
100488695 CDS
T01011
Symbol
notch4
Name
(RefSeq) neurogenic locus notch homolog protein 4 isoform X1
KO
K02599
Notch 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100488695 (notch4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Notch
EGF_3
NOD
C8A_B_C6_EGF-like
DL-JAG_EGF-like
JAG1-like_EGF2
NODP
Motif
Other DBs
NCBI-GeneID:
100488695
NCBI-ProteinID:
XP_031747113
UniProt:
A0A8J1INF6
LinkDB
All DBs
Position
8:73430519..73480028
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AA seq
2106 aa
AA seq
DB search
MGTIWILVPIIFLPLCQGLDCQIPCRNGGVCLSLENGTQICRCPDGEDCTYRDPCLSVQC
KNGGSCYRFSATDYRCQCETGWTGKNCEYLDFCTPNRCKNNGKCINMVPSFRCQCPIGFE
GESCEKDVDECQAADTCRNGGTCENLVGSFKCECPESYHGTRCEMRRGVCAADSCLNKGK
CQQMEFYKYQCVCPTGYTGSKCEENIDDCINHRCENGGSCKDGLGKYTCQCTPGFKGWYC
SNDIDECQTPAICKNGGTCQNIPGGYKCVCVNGWDGDNCEHNIDDCATATCAEGATCIDH
VGTFLCMCPPGRIGLLCTTQDGCVNNPCHPEATCDSQLTSVALCRCQPGYTGPTCHQDLD
ECQLGSSPCEHGGQCVNTPGSFYCSCPRGFTGARCETVQAECQPNPCHNKATCLDLLGHF
ECLCVPGYKGERCELEIDECQSSPCQNGGSCTDLLNDYICSCPQGYQGPQCEDDVDECSS
SPCKNGGQCHNQPGSYNCSCPGGFQGSVCETDINECASSPCHFGSCEDNPGFFTCHCDPG
YTGTVCEKEIDVCESQPCHFGAQCQARKNGFMCICQPGTTGTLCDEDINECHSSPCLNGG
ACNNTQGGFLCHCPPGTIQPLCTLQDNNCTNVTCVHGNCQKQNNRTTCICDEGWKGSVCD
TYIQCVTNPCQNGGVCQPFQERFICSCVSGYTGPNCETLLSPCYSNPCSNGGTCHHYPDQ
NVIQCDCPAGWQGSSCELDVNECEKRPCKNGGRCVNTPGAHHCICLPDYTGTLCEALVDP
CLSDKCQNGGTCVSETFSCLCPAGYTGEHCEEDIDECVSSPCQNGASCQNKANSYICVCD
EGYEGEKCEINTMDCTTSSCLNGGTCVDGIASFWCLCPERFTGKHCQEELSRCLSNPCTN
RGICQHIPGGYFCSCPYGYTGANCEMAVDFCSTAPCQNGGSCSQSGISYKCHCASGWIGS
HCETPLHGCRARVSQDVETTALCNGHGTCVDSGHSYICHCFPGYTGSLCEVKTGFCQPNP
CQNGAHCQEQDGSFLCQCLPGFLGQTCTERDPCLSRPCFHNGVCVAQGGEYKCQCPSGTQ
GIHCEINPDDCATVSSEPKCFHGGTCRDEIGGFSCFCPPGFVGRRCEGDVNECLSNPCHP
IGTEICVQLNNAYKCKCHRLYTGQKCDQPINFCANNPCFNGGSCAVTANTPLGFTCSCPK
GFSGATCSEPILPCSPHTCNNGGKCVSDTNGRYYCHCSNGYSGPHCLESIMPYTASASSS
PPVLPEPSNRCPYIDCKKVFKNGVCDKHCNNEQCLYDGFDCNATQACNPLYNNYCLDHFA
NGHCERGCDNVECGWDGGDCSNEERKKSEGSLILVLSYAPPVLHQREINALLRNLSMLIR
AGIRLQKDSSGNMLFRYRRSDSLDELFPDRLQRWEYEVIENPNLKDLKKETMSREDTIGC
VLFLEVFGAECVQPPCLHTSKNVADFVTALSEKTEPCLPYSLLGVKYKDAPIDPTQMSAT
QLPWPLVWASVAVGAALVLGGFIGVQLSRKRQHGVLWLPSGFSRHRSGEGIRRREPVGED
ATGLRPLKHDSVYDVDLATDEEILQPKYKRAKVPEECSILDHRQWSQQHIDAGVRFPQCI
ALTPPQQEADCRDIDVRGPDGVTPLMSAICAGGGLEPAGGGADPPEVESSAVVISDLISQ
GASLNAQTDSTGETALHLAARFSRQDAVKCMLDAGADTNVQDKLGRTPLHTAIAADALGV
FQTLLRCRQTDIDARMNDGSTPLILAARLPVQNMVEELVSCGADLGAADTRGKSALHWAA
AVNNAAAVKTLLCNGANKDLQDKRDETPLFLAAREGSLEATRILLEHQADRDLCDHTGRQ
PRHIARDRGHRDIQKLLEERCPAVPRNTSVATPSAGAQAKKTHRPRTKEHVKPTPLPHID
LSTSCYPQAPPLSAPPYIQGPPPDSSCCQSHHSLMSYGGNCQPYPRSGSFSSAVPGCQWG
NRGWRVHFCPSGCTVSEAPYSGGGQPVSPHAHWLPESHHPQSPKCQSQPSGYCPNSALEQ
TAPKDLPCTPTDQFGNSIYLTPPSSQYGYPSPASPEETSQTQTCMHHHPFLTPSPESRNP
WGVSSP
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaatatggatattggtgcccattatttttctgccattatgtcaaggtttggac
tgccagatcccctgcagaaatggaggtgtttgcttatccttagagaatggaactcagata
tgcaggtgtcctgatggagaagactgcacttacagagatccttgtctatcagttcaatgc
aaaaacgggggctcttgctatcgcttctcagctactgactatcgttgtcagtgtgaaact
ggatggacaggcaagaactgcgaatatcttgatttctgtaccccgaaccgctgcaagaac
aatggaaaatgcataaatatggtaccgagcttccgctgccaatgcccaataggctttgaa
ggtgagtcttgcgaaaaggatgtggatgaatgccaagcagcagatacctgccggaatggt
ggaacatgtgaaaacctggtgggttctttcaaatgtgagtgcccagagagttaccatggt
acccgctgtgaaatgagaagaggagtgtgtgcagcagacagctgcctaaataaaggaaaa
tgccaacaaatggagttttataaataccaatgtgtgtgcccaacagggtatacaggttca
aagtgtgaagagaatattgatgattgcatcaaccacagatgtgagaatgggggctcctgt
aaggatgggcttggcaaatatacctgccaatgtaccccagggtttaaaggttggtactgc
tcaaatgacattgatgaatgccaaactcccgccatctgtaagaatggtgggacatgccag
aacattcctggtgggtacaaatgtgtctgtgtcaatggctgggatggcgacaactgtgaa
cataacattgatgactgcgcaactgcaacctgtgcagaaggggctacctgcattgatcac
gtggggacgttcctctgtatgtgccctcctggaaggattggtctgctgtgtacaacccaa
gatggctgtgttaataacccctgccacccagaagctacctgtgacagtcaactaacatca
gttgctctatgccggtgtcaacctggatatactggccctacctgccaccaggatctagat
gaatgccagctgggctcgtccccgtgtgaacatggtgggcagtgtgtcaacacgccaggt
tcattttattgcagctgccctcgggggtttactggagcaaggtgtgaaactgtccaggct
gaatgtcagccaaatccttgtcacaacaaagcaacctgcctggatctgctgggacatttt
gagtgtttgtgtgttcctggatacaaaggggagagatgtgagttggaaatagatgagtgt
cagagctctccatgtcagaatgggggaagctgcacagatctgctcaatgactatatctgt
tcttgcccacaaggatatcagggaccacagtgtgaagatgatgttgatgaatgcagcagc
tccccctgtaaaaatggtgggcagtgccataatcaaccaggatcttacaactgtagctgc
cctggaggtttccaaggatcagtgtgtgagacagatataaatgagtgtgccagttctcct
tgtcacttcggttcctgcgaggataaccctggcttcttcacatgccactgtgaccccggg
tacactggcacagtctgtgagaaggaaatcgatgtgtgtgagagccagccatgtcacttt
ggtgctcaatgtcaagcccgcaaaaatgggtttatgtgcatatgccagccaggcactact
ggcacactttgtgatgaagatattaatgagtgtcactccagcccctgtctcaatggaggg
gcctgcaacaacacacagggtgggtttctttgtcactgcccccctgggactatccagcca
ctttgtacattgcaggataataactgcaccaatgtgacctgtgtccatggcaactgtcag
aaacagaacaacaggacaacatgtatttgtgatgaaggttggaaaggttcagtatgtgac
acttatatccagtgtgtcacaaatccatgtcagaatggcggtgtctgtcaaccttttcag
gaaagatttatatgctcatgtgtttcaggatacacagggccaaactgtgaaacactgctt
tctccttgttactcaaacccttgtagcaatggtggaacctgccatcactaccccgatcaa
aacgtcatacaatgtgattgccctgcaggttggcaaggttcttcctgtgaacttgatgtg
aatgagtgtgaaaaaaggccctgtaagaatggtgggagatgtgtaaacacccctggggct
caccactgcatttgccttcctgattacacagggaccctctgcgaggcacttgtagatccc
tgcttatcagacaaatgtcagaatggtggtacatgtgtgagtgaaaccttctcatgtctc
tgccctgcggggtacactggggagcactgtgaggaagacattgatgagtgtgtgagctcc
ccatgccagaatggtgcctcctgccagaacaaggcaaactcatacatctgtgtctgtgat
gaaggttatgaaggggagaaatgtgaaataaataccatggactgtaccaccagctcatgc
ctaaatgggggtacttgtgtggatggcattgccagcttctggtgcctgtgcccagaaaga
tttacaggtaaacactgtcaagaggagctgagcaggtgcctctccaacccctgcactaat
agaggcatttgccaacatattcctggtggctatttctgttcttgcccatatggctacacc
ggcgccaactgtgagatggctgtagacttttgttctactgctccgtgccaaaatggaggg
tcgtgttctcaaagtgggattagttacaagtgccactgtgcttcagggtggattggaagt
cactgtgaaaccccactgcatggctgcagggccagagtatcacaagatgtagaaaccaca
gccctctgtaatgggcatggaacttgtgtggattctggccattcctacatctgtcattgc
ttccctgggtatactgggtctctgtgcgaagtaaagactggtttctgccagccaaaccca
tgccaaaatggtgcccattgtcaagagcaagacgggtcattcctctgccagtgccttccg
ggattccttgggcagacttgcacagagagggatccttgcctgtcaaggccatgtttccac
aatggggtgtgtgtggcacaaggaggggaatacaagtgccagtgtccctcaggaacccaa
ggaatccactgtgagattaatccagatgactgtgctactgtatcctctgaaccaaagtgc
tttcacggtggtacatgtagggatgaaattggtggcttctcctgcttttgccccccagga
tttgtgggtagaaggtgtgaaggagatgtgaacgagtgtctgtctaacccctgtcatcca
ataggaacagagatttgcgtgcaactgaataatgcttacaagtgcaagtgtcatcgtcta
tacacaggtcagaaatgtgatcagccaattaacttctgtgcaaataacccctgtttcaat
ggaggctcctgtgcagttacagccaataccccacttggcttcacctgcagctgtccaaag
ggattttcaggagcgacctgcagtgagcccattttaccgtgcagtcctcatacctgtaat
aatggagggaagtgtgtttctgatacaaatgggcggtattattgccactgtagtaatggg
tatagcggcccccattgcctggagagtattatgccatacactgcttctgctagttcttct
ccaccagtcttacccgaaccatcgaatagatgcccctatatagactgtaagaaagtcttc
aaaaatggagtctgtgacaagcactgcaacaacgaacagtgtctgtacgacgggtttgac
tgcaatgccacacaagcctgcaaccccctctataacaattattgcctggatcactttgcc
aatggtcactgtgagaggggatgtgacaatgttgagtgtggttgggatggaggagattgc
tcaaatgaagaaagaaaaaaatctgagggttccctgatcctagttttgagctatgctcct
cctgtgcttcaccaacgagaaataaatgctctcctgcgcaatctgtccatgttaattcga
gcaggaataagattgcagaaagacagcagtggaaatatgctgtttaggtaccggagaagt
gacagccttgatgagctcttccccgatagactacaaagatgggaatatgaggtcatagag
aaccctaacctcaaagatctaaagaaggagactatgtcaagggaggatactattggatgt
gtcctgttcctagaagtatttggagctgagtgtgtgcaacctccttgtcttcacacatca
aaaaatgttgcagattttgtgacagctcttagtgagaaaactgagccctgtctaccatat
tctcttttgggagtgaaatacaaagatgcaccaatagaccccacacaaatgtctgccacc
cagctgccatggcctttggtttgggcatctgttgctgttggcgcggctctggttttagga
ggatttattggtgtccagctcagcagaaaacgtcaacatggggttctatggctaccatca
ggattcagtcggcatcgatcgggagagggtatcaggagacgggaacctgtaggagaagat
gctactggactcaggcccctgaagcatgactctgtgtatgatgtagatttagctactgat
gaagaaattctacaaccaaaatacaaaagagcaaaagtaccagaggaatgttccatccta
gaccaccgtcaatggagccagcagcatattgatgcaggggtgcgtttcccacaatgcatt
gctctgacaccaccacagcaggaagccgattgcagggacattgatgtgagaggtccagat
ggagtcaccccacttatgtcagcaatctgtgcaggagggggactggaaccagctggaggt
ggtgcagatccaccagaagtagagagctcggcagtagtcatatcggacctcattagtcaa
ggagccagtctcaacgcgcagacagactctactggagagacagcacttcacttagcagct
cgcttttcaaggcaagatgcagtcaaatgtatgctggatgcaggagctgataccaatgtt
caggataaactggggaggaccccgctacatactgctattgcagctgatgctcttggagtg
ttccagactttattgcggtgccgtcaaactgatatagatgctcgtatgaatgatggatct
actcctctaatattagctgctcggctacctgtacagaacatggtggaagaacttgtgtcc
tgtggggctgaccttggagcagcagatacccgaggaaagtctgcactacactgggctgca
gctgtgaataatgcagcagctgtgaaaactcttctctgcaatggggcaaataaggaccta
caagataagagggatgagacaccactctttcttgctgctcgagagggcagtcttgaagct
acccgaattcttcttgagcatcaagcagatcgtgacctctgtgatcacactggacgacag
ccaagacatatagcccgagatcgaggccacagagacattcagaaacttctcgaagagcgt
tgccctgctgttcccaggaatacttctgtagcaactccttctgctggagcacaagcaaag
aagacccacagacctcggaccaaggaacatgtaaaacctacccccttaccacatatagat
ttaagcacctcatgttatccccaggctcctcctctttctgctccaccatatatacaagga
cccccaccagacagcagctgttgtcagtcccaccattcactgatgagctatggaggaaac
tgccaaccatatcctaggagtggctcattctcatctgcagtaccaggatgccagtggggt
aaccgaggctggagagttcatttttgtccatcaggatgcacagtgtctgaggcaccctat
tcagggggaggtcagccagtgtctcctcatgcccattggcttccagaatctcaccatcca
cagtctccaaaatgccagagccaaccatctggttattgcccaaattcagccttggagcag
actgcccctaaagacctgccttgtacacccactgaccaatttgggaacagcatctattta
accccgccatcttcacagtatggctatccttcccctgctagcccagaggaaacatctcag
acacaaacttgcatgcaccaccaccccttcttaaccccctctccagagtcgaggaacccc
tggggtgtttcttccccataa
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