Xenopus tropicalis (tropical clawed frog): 100489006
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Entry
100489006 CDS
T01011
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100489006 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100489006 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100489006 (grin2a)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100489006 (grin2a)
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
100489006
NCBI-ProteinID:
XP_031749422
UniProt:
F6X9P6
LinkDB
All DBs
Position
9:37404796..37708096
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AA seq
1450 aa
AA seq
DB search
MGIFALLLYTLLYAGDLGQGAEKSFPVLNIAVILGRTRYITERDIRSLWTRDMSLDFDVN
VVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAIAQILDFVSSQTFIPILGIH
GGSSMIMADKDEMSTFFQFGASIKQQAIVMLNIMEEYDWHVFSIITSTFPGYRDFISFIK
TTVDNSFVGWEVQNVITLDTSYTDARTLTQLKKIHSSVILLYCSKDEANYIFVEARSLGL
MGYGFVWIVPSLVTGNTDIIPYEFPSGLVSVSYDDWDYNIEARVRDGLGIITTAASAMLE
KHSVIPEAKTSCYAQNERNEPPLHTLHKFMINVTWDGKDLSFTEDGYQANPKLVVLLLNM
DREWEKVGKWENKSLNMKYPVWPRITASLDSDPDDNHLSIVTLEEAPFVIVENVDYLTGT
CVRNTVPCRKYFRLNNSTTEGTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK
IKNVWNGMIGEVVYKRAVMAVGSLTINEERSEAVDFSVPFVETGISVMVSRSNGTVSPSA
FLEPFSASVWVMMFVMLLLVSAVAVFVFEYFSPVGYNRNLADGKAPHGPSFTIGKAVWLL
WGLVFNNSVPVQNPKGTTSKIIVSIWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDK
KFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHQYMVKFHQKGVQDALVSLKTGKLDAF
IYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSRWKRPIDLALLQFVGDGEM
EELEKLWLTGICHTEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYWKLRYC
FTGVCTGTPGLLFSISRGIYSCIHGVHIEEKKKSPDFSFTASQTNMLKLLRASKNIANLS
NLNQSQCNSPKRTSDYIQRNSLLMDMVLDKGNLSYSDNRPFQQKDVYSENTYDLAMLSGN
HPKDNLNNYVFQGQHPLTLNESNPNTVEVAVSAEPKLNSRPRQLWKKSVETLRQNQGSVN
ENGTEESKPSTKNQRFLPEDGHFSDVSEASSRATCHIDSENNNKHHKSKDNLKKRSVSSK
YPRDCSEVELSYLKLKHGSNRDKVYTIDGDKEPSFIMDQPKYSENSPDQDDDYPDVYQDH
NDNYRKAEALQPDRTPLHSEGRLPNNDIQYKLFSKHYSSKEKNTSMSESNDRHRQNSTHC
RSCLSNMPNYTGHYTARSPYKCDDCLHIGKLYDIDEDQMLHEAANSMHSEDFYEHNWLEN
NALHFQKKNKLRINRQHSCDNINKPREQDLGRPPRSVSLKEKERYIQDSPFAKFLIVPPE
KLLGNNTALFTDSLKESKRSKSLYPDNSSDNPFLHSYQETQKLSHGRSSSDIYKQSSLTK
ARNDNYLRSSIKSTSSYSSRDGRVPNDMCASEYALPYVTSNNSVYSAPRVVNSCSNRRVF
KKMPSIESDV
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgctttactgctatataccctcctgtatgcaggggacctgggccagggc
gcagagaaaagtttccctgttttgaatattgcagtcattttgggaaggactcgctatatc
acggagagggacatacgctctctatggacaagggatatgtccttggactttgatgtcaac
gtggtgaccttgcttgtgaaccaaactgaccccaagagcatcatcacccatgtgtgtgac
ctcatgtcaggcaccaagattcatggggtggtgtttggagatgacacagaccaagaggca
atagctcaaattttggattttgtttcgtctcagactttcatcccaattctagggattcat
gggggatcctcaatgattatggcagacaaggatgaaatgtccactttcttccaatttgga
gcttccatcaagcagcaagccattgtcatgctgaatattatggaagaatatgattggcat
gtattttccatcataacaagcacttttcctggatatcgagattttataagtttcattaag
accaccgtggacaatagttttgttggctgggaagtgcagaatgttattactttggataca
tcatatacagatgcaagaacactaacgcagctgaagaaaattcattcttctgttatactc
ctttattgttcaaaggatgaagcaaattacatttttgtggaggcccgttcccttggtctt
atgggatatggttttgtctggattgtgcctagcctagtaacaggaaacacagatataata
ccatacgagtttccatcaggtttggtttctgtgtcatatgatgactgggattataacata
gaagctagagtgagggatggccttggaattataaccacagcggcatcagcaatgttggaa
aaacattcagtgattccagaagcaaaaactagttgttatgctcaaaatgaaagaaatgaa
ccaccacttcatactcttcacaaattcatgataaatgtaacttgggatggcaaggatttg
tcctttaccgaagatggatatcaagcaaatccaaaactagtggttttattgttgaatatg
gatagagagtgggagaaggtggggaaatgggagaacaaaagtttaaacatgaaatatccc
gtgtggcccaggattacagcttccctggacagtgatcctgatgacaaccatttaagcatt
gtcactttagaagaagctccatttgtgattgttgaaaatgttgactacctgacaggaaca
tgtgtgagaaacactgtgccatgtagaaagtattttcggttaaacaactcaacaactgaa
ggtacatcagtaaaaaagtgctgcaaaggattctgcatagatattttaaagaaactttca
aagactgtgaaattcacatatgacctttacctggttacaaatgggaagcatgggaaaaaa
atcaagaatgtttggaatggaatgattggtgaagtggtttataaacgagcagttatggcc
gtgggttcactcacaatcaatgaagagcgttcagaagcagttgatttttcagtgccattt
gttgaaactggaattagtgttatggtatcacgtagcaatggcaccgtttctccatcagca
tttttagaaccgtttagtgcttctgtctgggtgatgatgtttgtgatgcttctccttgtg
tctgcagtggctgttttcgtatttgagtactttagtccagtaggatataacaggaactta
gctgacgggaaagctccgcatggaccttctttcacaattggaaaagcagtatggctgctg
tggggtttggtcttcaataattcagtacctgtgcaaaatccaaagggcacaaccagcaaa
atcatagtgtcaatttgggctttttttgctgtgatatttttggcaagttacactgctaac
ttagctgctttcatgattcaagaagaatttgttgaccaggttactggacttagtgataaa
aagtttcaaaggccacatgattattctcctccatttcgttttggcacagttccaaatggc
agcactgaaagaaatattagaaataattatcctgatatgcatcaatacatggttaaattt
catcaaaaaggagtacaagatgccttagtcagcctaaagactggaaagctggatgcattt
atctatgatgcagcagtgctgaactacatggctggaagggatgaaggatgcaagttggtg
acaattgggagtgggtatatctttgctactactggctatggtatagctctccagaaaggt
tcaagatggaaacgccctattgatttagctcttctacagtttgttggagatggtgaaatg
gaagaattagaaaaattgtggttaactggaatctgccatactgagaaaaatgaagtaatg
agtagccagctagatattgacaacatggctggagtattctacatgcttgcggcagctatg
gctttgagcctcataacctttgtatgggaacatctgttttactggaaactacgatattgt
tttacaggagtttgtactggcacaccagggctgcttttctcaattagcaggggcatttac
agttgtattcatggagtccacatagaagaaaagaaaaaatctcctgatttcagttttact
gcctctcagacaaatatgttgaaactactgagagcatccaaaaatatagcaaatctatcc
aatttaaatcaatcccagtgcaactcacccaaaagaacatctgactatattcaaagaaat
tcattattaatggacatggttttagataaaggcaatttatcatactcagacaacaggcca
tttcaacaaaaagatgtatatagtgaaaatacatatgatcttgccatgttatctggtaat
caccccaaagacaaccttaacaactatgtttttcaaggtcagcacccacttactcttaat
gaatctaatccaaacacagttgaggttgctgtaagtgcagaaccaaaattaaactccaga
cctagacaactttggaagaaatcagtagaaactttacgacaaaaccagggttcagtaaat
gaaaatggtacagaagaatcaaagccatctactaaaaatcaacgctttcttccagaggat
ggtcatttttcagatgtttcagaggcatcaagcagagccacatgtcatatagattctgaa
aacaataataaacaccataaaagtaaggacaacttaaaaaaacggtctgtgtcctctaaa
tatccccgagattgcagtgaagttgaactgtcatatctaaaactcaaacatggctctaat
cgtgacaaagtctacacaattgatggagataaggagccaagctttataatggaccagcct
aaatatagtgaaaattctcctgaccaagatgatgattatcctgatgtataccaagatcac
aatgataattataggaaagcagaagctctgcagccagatagaactcctctgcatagtgaa
ggcagacttccaaataacgacatacagtacaaattattttcaaagcactacagttcaaaa
gaaaagaatacatctatgtctgaatccaatgacagacataggcaaaactctactcactgc
agaagttgcctttctaatatgcctaactatactggccattacactgcaagatccccatac
aagtgtgatgactgtctccatatagggaaactatatgatattgatgaagatcaaatgctg
cacgaggcagccaactctatgcattctgaagatttttatgagcacaactggcttgagaat
aatgctctacactttcagaaaaaaaataagttaagaataaacaggcagcattcatgtgac
aacattaataaacccagggaacaggatcttggaaggccaccacgtagtgtaagtttgaag
gagaaagaaaggtacatacaagatagtccatttgctaaatttcttattgttccacctgaa
aaactgttggggaacaatactgcgctttttacagactctttaaaggagagtaagagaagc
aagtctctttatcctgataactcttctgacaaccctttcctgcattcttatcaggagact
caaaaactaagtcatggaagaagttcttcagacatttacaaacagtcctctttaacaaaa
gcaagaaatgataactatttaaggtcatctattaaatctacttcttcatattcttcaagg
gatggacgggtacctaacgacatgtgtgcttcagaatatgctctgccttatgttacaagc
aacaatagtgtgtattcagctccacgggttgtaaattcctgcagcaatagacgtgtgttt
aagaaaatgcctagcattgaatctgatgtttaa
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