Xenopus tropicalis (tropical clawed frog): 100490932
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Entry
100490932 CDS
T01011
Symbol
clca1.2
Name
(RefSeq) calcium-activated chloride channel regulator 1
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100490932 (clca1.2)
Ion channels [BR:
xtr04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
100490932 (clca1.2)
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA_2
VWA
VWA_CoxE
MG2
vWA-TerF-like
Shisa
Motif
Other DBs
NCBI-GeneID:
100490932
NCBI-ProteinID:
XP_002934201
UniProt:
A0A8J0QL21
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Position
4:complement(106768066..106789167)
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AA seq
919 aa
AA seq
DB search
MSFSSLFALVLTFNVFLVSGTSIKLQNGGYEDIVIAINQGLGENVKIIDNIQNMIKEASQ
YLFSATKNRVYIRSVKILIPITWPNNNYAKAKTETYDKADVIIASPHLKFGDDPYTLQYG
RCGEAGKYIHMTPDFLLNDNLISIYGPRGRVFVHEWAHLRWGVFDEYNYEKPFYIAGNKN
IEATRCSADIIGTHIKQPQGLPCNRDPQTGLYEDGCVFVPEQNQAAKASIMYLQALPSVT
EFCDKNHNTEAPTLQNRICNSRSTWDVIMNSTDIKATPPQADSNIPVPTFTLLQSSDRVV
TLVLDVSGSMASDGRIGRLYQAAEVFVMQIVEEGSHVGIVSFSTSTTVLSKLVQVIDDTQ
RNHLKFLLPKTAVGGTNICAGIREGIKVNNQHDGSSYGTEIVLLTDGEDNYNTSLCFPDI
FNSGIIVHFIALGPNPNPNLETIVDMTGGLRFLATDKVDAQGLIDAFSSLTAGDGATTQH
AIQLESSGSVVNPKDCLTGTVFIDKTVGNGTFFLVTWVTLIPAITLTDPNGKIYTAKDFT
ADTTSKSTRLAIPGTAERGAWQYSLCNTHTTNQAIGILVTSRAADENVPPITVNAHMNQN
ANNFPEPMVVYASVNQGLLPVIGANVTAIIEPVNGNPDPLDLLDNGAGADIVKNDGIYSK
YYTNFQGNGRYSLKVRVENINNKGRLALPRSQALYIPGYLENGQITMNPLRPVINDEDLN
LGEFSRTASGGSFIVNNIPAGPQPDLYKPEKVTDLEAKINGNTIVLTWTATGDDLDQGIV
SGYDLRMSTNPSDLRINFDNSIAVNTSSLTPQIAGSSESFTFVPDKITIENGTILYFALI
AFDKVAQKSDLSNIAQAALLIPPTPATVPPANDSSGSLDITFLSLIVCSSVIIICIIISI
TVCAVRCCDKKKHNPEMKL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctctagtctctttgcattagttttgacctttaatgttttcttagtatctggt
acttcaatcaaacttcagaatggtggctatgaagacattgttatcgcaattaatcaagga
ttgggagagaatgtcaaaattattgacaatatacagaatatgataaaagaggcttcacag
tatttattcagtgctacgaagaatcgagtctatataagaagtgtcaaaatcttaattcct
ataacttggccaaacaacaactatgcaaaggcaaaaacagaaacctatgataaggcagat
gtgatcattgccagccctcatctcaagtttggagatgacccatataccctgcagtatggt
agatgtggagaagcaggaaaatacattcatatgacaccagacttcttgctgaatgacaat
ctgatttcaatttatggacctcgagggagagtgtttgtgcacgaatgggcgcatctaaga
tggggcgtgtttgatgaatacaactatgaaaaacctttttatattgctggaaataagaat
atagaagcaacaagatgctctgctgatattattggcacccacattaaacaacctcaagga
ctaccctgcaatcgtgacccacaaacaggcctttatgaagatggctgtgtctttgtacct
gaacaaaaccaggctgccaaggcatctatcatgtatttacaggcactgccatctgttact
gaattctgtgacaagaaccataacactgaggctccaacattacagaaccgaatctgtaac
tcacgtagcacatgggacgtcattatgaactccactgatataaaggccactcctccacag
gctgactccaatatcccagttcctacattcacgctgctacagagttctgatagagttgtg
actctggtgcttgatgtatctgggagtatggccagtgatggtcgaattggacggctgtac
caggcagcagaagtgttcgttatgcagattgttgaagagggctctcatgttgggatcgtc
tcattctcaacctcaacaactgtcctttccaaattggtgcaagtaatcgatgacactcag
cggaatcatttaaagtttctccttcctaaaactgcagttggaggaacaaacatttgtgca
ggaattagggagggcatcaaggtaaacaatcagcacgatggatcatcatatggtactgag
attgtattactgacagatggagaagataattataacacgtctctgtgctttcctgatata
ttcaacagtggaataattgttcatttcattgctctgggtccaaatccaaacccgaacctt
gaaacgattgttgacatgacaggaggattacgctttctagcgacagataaagtagatgct
caaggattaattgatgcttttagcagcctcacagctggagatggggctactacccagcat
gcaattcagctggagagctctggctcagttgttaacccaaaggattgcttaactggcact
gtctttattgacaagacagtggggaatggaacgttctttcttgtcacatgggtaaccttg
ataccagccatcactctaacagacccaaatggaaagatatacacagctaaagattttacc
gctgacacaacttcaaaatctactagacttgcgatccccggaacagctgagagaggagct
tggcaatacagcctgtgcaatactcacacaacaaatcaggccataggcattttggtgaca
tctagagcagcggatgaaaatgtacctccaattacagtgaatgctcatatgaatcagaat
gcaaataacttccctgagccaatggttgtctatgcatcagtaaatcaaggactattgcct
gtcataggcgccaatgtaacagccattattgagccagtaaatggaaatccagacccttta
gatctcttggacaatggagcaggtgctgatattgtaaagaatgatggaatctactcaaaa
tattacacaaattttcaaggaaatggaagatacagtttaaaagtgcgagtggaaaacatc
aataataaaggccgactggcacttccaaggagccaagctctttatatccctggctattta
gaaaacgggcaaataacaatgaacccattacgaccagttataaatgatgaggaccttaat
ctgggagaattcagtagaactgcttcgggtgggtctttcatagtaaataatatacctgca
ggtcctcagccagacttgtataaaccagagaaagtaacggacttggaggcaaaaataaat
ggaaacacaattgtgttgacctggacagcgacaggggatgacctggaccaaggaatagtt
tcaggatacgacttgagaatgagcacaaatcccagtgaccttaggatcaattttgacaat
tctatagcagtcaatacttccagtctgacaccacagatcgctggatccagtgaatcattt
acatttgttccagataagattacaatagaaaatggcaccatcctttattttgctctcatt
gcttttgataaagttgcacagaaatcggatctgtcaaacatagcacaagcggctctgctt
attcctccaactcctgctacagttccacccgcaaatgacagttctgggagcctggacata
acattcctgtcactgatagtttgttcatctgtgatcattatttgtattattataagcatt
actgtgtgtgctgtgagatgctgcgacaagaagaaacataacccagaaatgaaactgtaa
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