Xenopus tropicalis (tropical clawed frog): 100492512
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Entry
100492512 CDS
T01011
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00780
Biotin metabolism
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
100492512 (hlcs)
Enzymes [BR:
xtr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
100492512 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
100492512 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
100492512 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
100492512 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
100492512
NCBI-ProteinID:
XP_004912172
Xenbase:
XB-GENE-1009304
UniProt:
F6QNE8
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Position
2:12678145..12770923
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AA seq
853 aa
AA seq
DB search
MLITLCYMYLWLRFRSSYAVLIRSCVHRLHRTNSFTFCTQRQGRKSLRGTQEPKEDKFSL
KVGRKLFLIEGSQLFEDLNKWNLLLESPRDSDLGKGQITFITESVSLPSETLSASSNSSK
KVQKLSEYCLLLARYHEDPCKLLAEASVEDFSELGIAFMEDRLLMDNGSPLHKITSVYLK
ESALKAQETEETNLRTSKSRTEPHLAPSVGQENMGTAESSAATDKGEELEAHRHLHLSSC
HECLELENRTIESVRCASEENIPDLPEDFSSLEGSELQNHGSLNVSGKPPNVLIYCGPET
GGQFQEIKSVLLQCFDSSRYVIYPLPDDQVLKAPWTDNCLLLVVASDHPVSNHIEEQFLS
YLSKGGKILGLSSSSSFAFGSVSVTSKSQLQGSVQALVFGRPNCDPVSLDLVASGKVFAE
LSSEASPQVSGWGYLNNDDKDLILVHQTYGDNGGEAVLCQVKLEASPESVSEDDTGTFES
LKKSNPLRYAVLTQILISLGLDCDLASPPALTPVYLLTAEQTCYDDVLHWLKTRTDSGGL
IKSGKMSLKVCPSPQPDIDVSPTLSPLVTQPESFTCEEFSVERYSESLCTDKLGKIVLFA
EVTTTTFNLLEGLMFHEPKEMGLIAIAAHQTQGKGRGGNAWLSPKGCALMTLHISIPLLS
ELGQRIAFVQHLMSLAVVESVRSLPGYEDIDLRVKWPNDIYYGDLMKIGGVLVNSTLMGN
TFHILIGCGFNVSNSNPTVCINDLIAQHNKTYKTNIEPLRVDTLIARAVTALEGLIKAFQ
SKGPDGVLPAYYKYWLHSGAKVRLGGDDGPLAWIIGVDDSGFLQVLQEGKEIVSVHPDGN
SFDMLRNLIIPKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgctcattaccctctgctacatgtatctgtggctgcgattcagatcctcatatgctgtg
ctgatccgcagctgtgtgcatcggctgcacaggaccaactcattcactttctgtactcag
cggcaggggagaaagagccttagaggaacccaagagccaaaggaagataagttctctctg
aaagtgggcagaaagctcttcctcattgagggttcccagctctttgaagatctgaacaaa
tggaatctcctccttgaatcccctagagatagtgatctgggaaaaggacagattaccttt
atcactgagagcgtctctttaccaagtgaaaccttatcagcctcatccaactcttccaaa
aaggttcagaagctgtccgaatactgtttgcttctggctcggtaccatgaagatccctgc
aagctgcttgcggaagccagtgtagaagacttcagtgagctcggcatagcgtttatggaa
gacagactgctgatggacaatgggtcaccgctccataaaatcacatctgtatatctaaag
gagtcggctctgaaggcccaagaaacagaggagacaaatctcagaacctctaagagcaga
actgaaccgcatttggctccctcagttggacaggaaaatatgggaacggctgagagcagt
gccgccactgataaaggcgaggagctggaagcccaccgtcatctccatctgtcaagttgc
cacgagtgcttggaactggagaaccgcaccatagagtccgtgcgctgtgcctctgaagag
aacattcctgacctccccgaggatttcagcagcttagaaggcagtgaattacagaaccac
ggcagccttaacgtgtcggggaaaccacccaacgtccttatatactgcggccctgaaacc
ggcggccaattccaagaaatcaagtctgttctcctacagtgtttcgattcctctaggtat
gtcatttatcctcttcctgatgatcaggttctgaaagctccgtggacagataactgcttg
ttattggtggtggcctccgaccatccagtctcaaatcacattgaagagcagttcttgagt
tatttgtccaaaggtggaaagattttgggactttcctcctcctcctccttcgccttcggc
agtgtatcggtaacgagcaaaagccaactgcaggggtctgtccaggctctggttttcggg
agacccaactgtgacccggtcagtttggacttggtggccagcgggaaagtatttgcggaa
ctttctagtgaagcatcaccgcaagtgtcagggtgggggtatttaaacaacgacgacaaa
gacttgattctggttcaccagacctatggtgataatggcggggaagctgttctttgccag
gtaaaacttgaagcctctccagagtctgtcagtgaggacgacacagggacctttgagtca
cttaagaaaagcaaccccctgagatacgccgtcctgacccagatcctcatcagccttggc
ctggattgtgacttggcctcacctccagctctcactcctgtttatttactcactgctgaa
cagacttgttatgatgacgttctccattggctcaaaacccgaacggacagcggtggcttg
ataaagtctggcaagatgtctctaaaagtctgcccttcaccccagcccgacatagacgtc
agcccaaccctgtcacctcttgtaacccaaccggaaagcttcacatgtgaagaattcagc
gtagagaggtacagcgaaagcctctgcacggacaagcttggcaaaatcgtgctttttgct
gaagttaccaccacaaccttcaacctactggaagggctgatgtttcacgaacccaaggaa
atggggttaattgccatcgcagctcatcagactcaaggcaaaggtcgaggcggcaatgcg
tggctcagccctaagggatgtgccttaatgacgttgcacatctcaatcccgttgctgtct
gagctgggccagaggatcgcttttgtacaacacctgatgtccctggcggtggtggaatct
gtgaggtccttacctggatatgaggacattgacctgagagtaaaatggcccaacgacatt
tactatggcgatttgatgaagattggtggagttctggtgaattctacacttatgggaaac
acttttcacattctaattggctgcgggttcaacgtcagcaatagtaacccaactgtttgc
atcaacgatctcatcgcgcagcataacaagacctataaaacaaatattgaaccactgcgg
gtggacactttgatcgccagggctgtgacggcattagaaggactcataaaggcatttcag
agcaaaggacccgacggtgtcctacctgcttattataaatattggcttcacagtggtgct
aaggtccggctgggtggggacgatggtcctttggcatggataattggagtcgatgattcc
ggattccttcaggttctacaggaagggaaggaaattgtctcagtgcatcctgatggcaac
tcttttgacatgctcagaaacctcattataccaaagaagtga
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