Xenopus tropicalis (tropical clawed frog): 100493853
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Entry
100493853 CDS
T01011
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100493853 (slc6a4)
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100493853 (slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100493853
NCBI-ProteinID:
XP_017946918
UniProt:
A0A6I8RCX3
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Position
2:complement(32366451..32427950)
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AA seq
664 aa
AA seq
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MDRKPTCIESPSLGSEKEPLTCRARSECKKDGQLLRNCKPSLRLSEELNKVHPSPGERGE
PGHISNKYLAVQSPEAPCNGMRNGGDEGSTPTLTVLPACRAEIQHLQTEIGERETWSKKI
DFLLSVIGYAVDLGNVWRFPYVCYQNGGGAFLIPYVIMAVFGGIPLFYMELAMGQYHRNG
CISIWRKICPLFKGIGYAICMIALYVAFYYNTIMAWALYYLIFSFRSELPWTSCLNEWNT
GNCTNYFQNSSVGWSNSSISPAEEFYTRLVLQIHKSKGLHDLGGISWQLTLCLLLIFTVV
YFSIWKGVKTSGKVVWVTATFPYIVLALLLIRGATLPGAWRGVLFYLQPDWEKLLTTAVW
VDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALITSTVNCMTSFMSGLVIFTVLGYM
AEMRNLDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGV
ITAVLDEFPHIWGKRRELFVFLLISVCFLGALSTLTFGGAYMVKLFEEYATGPAVLTVVF
LEAIAVSWFYGINQFCRDVREMLGFSPGWFWKICWVAICPLFLLFIICSFMSSPPDLRLF
NYQYPSWTVVLGYCIGTSSFICVPAYMVYLLTSTPGSIKERFLKSITPEVSREIPLGGIH
MNAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaaccgacctgcattgagagcccatcccttggttctgaaaaggagcctctg
acctgcagggctcggtcagagtgtaaaaaggatggacagctactgaggaactgcaaaccc
tcattgcgtctctctgaagaactcaacaaggtgcatcccagtccaggagaaagaggagaa
ccaggacatatatccaacaaatacttggctgtgcagagtcccgaggcaccttgcaatggc
atgagaaatggtggcgatgaaggctcaacccctacgcttactgtccttccagcttgtaga
gctgagatacaacatctgcaaacggagatcggagagagagagacatggagtaaaaaaatt
gactttcttctatctgttattggatatgctgtagacctgggaaacgtgtggagatttcct
tatgtctgttaccagaatggaggaggggcatttcttatcccatatgtgatcatggctgtt
tttggtgggatcccattgttttatatggagctggccatgggtcagtatcacaggaatggt
tgtatttctatatggagaaaaatctgccccttatttaaaggaattggctatgctatctgc
atgatagctctttatgtagcattttattacaataccattatggcctgggccctctactac
ctcatattctccttccgctctgagctgccctggaccagctgcctcaatgagtggaacaca
ggcaactgcaccaactacttccaaaacagcagtgttggctggtctaacagctccatctcc
ccagcagaggaattttacacccggctagtgcttcagatacacaagtcaaaaggtctgcat
gatcttgggggaataagctggcagctcactctctgtctgctcctcatatttactgtggtc
tacttcagcatatggaaaggagttaaaacatctggcaaggtggtatgggttactgctaca
tttccttacattgtgcttgccctcctgttaatacgaggcgctacgcttcctggtgcctgg
aggggggttcttttctacctgcagcctgactgggagaagcttctaactactgcggtctgg
gtggatgctgctgcacagatatttttctctcttggcccaggattcggagtattactggca
ttcgccagctacaataaattccacaacaattgttatcaggatgctctgattaccagcaca
gtgaactgtatgacaagtttcatgtccgggttggtcatattcactgtcttgggctacatg
gcagaaatgaggaatttggatgtctcagaagtggccaaagatacaggtccctccctattg
tttatcacctatgctgaggccattgcaaatatgccagcatctaccttctttgccattata
ttctttctgatgctaatcactttggggctggacagcacatttgcagggctggagggggtc
ataaccgccgtgctggatgagttcccacatatatggggaaagcgccgagagctgttcgtc
ttccttctgatctcggtctgcttcctcggggccctttccacactaacatttggtggtgcc
tacatggtgaagctgtttgaggaatatgccactggtcccgccgtactgacagtagtattt
ttggaggccattgctgtgtcttggttctacggaatcaatcagttctgcagagatgtcagg
gagatgcttggcttctctcctggatggttctggaagatctgctgggtggcaatctgcccc
cttttcctcctgttcattatttgcagcttcatgtccagccccccagatctacggctgttt
aactaccagtatcccagctggactgtagtgctaggttattgcattgggacatcctctttc
atctgcgttccggcatacatggtgtaccttctcacaagcactcctggctcgataaaagag
cgctttttgaagagtattaccccagaggtctcgagagaaatccccctcggtggtatccac
atgaacgccgtttaa
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