Xenopus tropicalis (tropical clawed frog): 100494894
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Entry
100494894 CDS
T01011
Symbol
cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100494894 (cacna1h)
04020 Calcium signaling pathway
100494894 (cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100494894 (cacna1h)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100494894 (cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100494894
NCBI-ProteinID:
XP_031748783
Xenbase:
XB-GENE-6042121
UniProt:
A0A8J1IT67
LinkDB
All DBs
Position
9:18004524..18317152
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AA seq
2460 aa
AA seq
DB search
MTDGERKEPFQPLAGDDIRVPIPPTPQAGDPSEEEDAGNAEKSALGSLGSGGSSGRGREQ
GMGSEEGEQVPYPALAPTVFFCLSQTTRPRNWCLRLVCNPWFEHVSMLVILLNCVTLGMF
QPCEDTNCMSERCNILEAFDGFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNWLDFFIVM
AGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFMDTNFVMSYNFTPLRPYYQVDDAEDNPYICSSNRDNGML
KCQDIPPKMDCSHVYYSDFPSRNSCVNINQYYNVCKPGEFNPHKGAINFDNIGYAWIAIF
QVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQL
MQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLYNNWQNKRRKKVQP
NSNTNSQGRHRKCKRRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSSPEICDVEMKIMK
PKNQLRLPPASPSLQSMSPNSEAVHSIYHADCHLEAPQRKSSKSSNASSNIKLNAGLNHS
NMNYPTIMPSQANKTSPATLPKGKRNGSNAVSLLSSPVSMKADSFGKTNHLVGEHGLCRS
SSKLSGLSVPCSLPSPQPSPLLCEIQNCPYCANLLENPDLELSDSESCESDSNGVYEFTQ
DLRRGDQRDQVQKGRKLKTKPKEANKVYLLWEEFTVRLKRIVDSKYFNRGIMIAILINTL
SMGIEYHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGIFQYIKNPYNIFDGIIVVIS
VWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLVKTMDNVATFCMLLMLFIFI
FSILGMHLFGCKFTWTADTGETVKDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTS
SWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTEEDKASGNFDEDLEKLKEL
RAAELKMYSLAVTPNGHLDPRSSMPPPIIMRTAATPMPTPKSSPCMDSSHPFGDSRRESS
VSIDPSIVDQKSLASLRSTPCTPWGTYSNWGSRRSSWNSLGRAPSIKKKSQSGERESLLS
GEGKGSTDDDSDDCKSSPAARVSLHRRAGSLDTRGSLDIPDFLQVPTLRHSLSVSPLAMV
PSDYQDCNGKMMHVPSDLFVRVEKHREDPLEYEDDIEDSYCFRIRKMLEPYKPTWCKTHE
DWSLYMFSPQNQFRMMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPNSLERIFLSV
SNYIFTAIFVLEMAIKVVALGFVSGENTYLQSSWNVLDGILVFVSIIDIVVSLASAGGAK
ILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQ
LFKGKFYYCEGLETRNITNRSECTRARYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIM
YDGLDAVATDVQPVKNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEA
RRREEKRLRRLEKKRRSKALYMSEAQRRPYYAEYSPARLYIHTMCTSHYLDLFITCIICI
NVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALFKLVAFGFRRFFKDRWNQLDLAIV
LLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQV
GNLGLLFMLLFFIYAALGVELFGKLVCNEENPCEGLSRHATFENFGMAFLTLFRVSTGDN
WNGIMKDTLRECNSDDKNCLTYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKE
AKEDAEMDAEIEMEMSRALTPISGGCTPASDGKGTEGGQDPLKGELLKQVGGAVCQENVT
LVIPESMEGAALLNDAVPACSIYQQQALPLPLQPCVLGHEDGDFQRRDGSGSRNLLAVKK
ISVSRMLSLPNDSYMFRPVLPAKSSYPLQEVETTEDNSPHGSTASLHSQPGDNNSLLNIP
VECQPQASVSNHQDSADLPKIPPPHTSSRSPSLNRSLRRQEAIRMDSVDQGGDSKDLNVE
STESLHLGAPSVTTLVPNLLCTLNVSLQGTPQSSPRLSPQPRHSSVLTHNHVYSQHSIPS
RPSSVSSGNSNPEESMFESSDLADEEVSHINSSAKDWRGSSNNRSHSVSPFISQSSSPPP
LSPSLKNCNSTVSLAGSSGKDKDLKKFYSVDTQGFLAKPCWGDDQRRHSIEICPSIDDGD
SCFDLSMEDKHCSSVLIRSDPEYINGVRRKKKMSPPCISIDPPMEDEGGTASRTKASENS
MMLRRRTPSCESTAYRDSLDLSDNQLGDQISKTDRRTQVPCRNEHLIIPSYSFDKVDGNG
FSDLISNSGGSTPTSVFNEPVSLEMKQKDHNDLSGVSKVSLKTALDHVSNPTEDIIDNPL
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggaaagagcccttccagccactggccggagacgatatccgggtg
cccatacccccgacaccccaagcaggggaccccagtgaagaagaggatgcgggaaatgca
gagaagtcagctctgggcagcttgggctctggaggttcttctggaagaggtcgtgaacaa
gggatgggctcggaggaaggagaacaggttccatacccagccctggcacccaccgtcttc
ttctgtctcagccaaaccacgcgtccacggaactggtgcctcagactggtctgtaatcca
tggttcgagcatgtcagcatgctggtcattttgctgaactgcgtcaccctggggatgttc
cagccctgcgaggatacaaactgtatgtcagagagatgcaacattctagaggcattcgac
ggcttcatctttgcattctttgctgtggagatggttattaagatggtagcgcttggcatc
tttgggcagaagtgctacctgggagacacatggaactggctggatttcttcattgttatg
gcagggatgttggaatattccctcgatggacacaatgtcagcctatccgctatccgcact
gtacgtgttttaaggccgctaagagccattaacagggttcccagtatgaggatactggtg
accctgctgctagatactctgcctatgttaggcaacgtccttctcttgtgtttctttgtg
tttttcatctttggaatcgtcggcgttcagctttgggctgggctactgcgcaacaggtgt
tttatggatacaaattttgtaatgagttacaatttcacccctctgaggccgtattaccag
gtggatgatgcagaggacaacccttatatctgctcctctaaccgagacaatgggatgtta
aagtgccaggacatccctcccaaaatggactgctcccatgtatactactcagatttcccc
agtaggaatagctgcgtgaatattaatcaatactacaacgtatgcaagccgggagagttc
aatccacataaaggggccattaattttgataacattggctacgcctggatagccattttt
caggttataaccctagaaggatgggttgatatcatgtactatgttatggacgcacattct
ttttacaattttatatattttatactacttataatagtgggttctttcttcatgataaac
ttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgagagaaccagcta
atgcaggagcaacgggctcgttacctctccaacgacagcacaatcgccagcttctcggag
ccagggagctgctatgaggagctgctcaaatacatctgccacatcttcaggaaggttaag
cgaaggacgttaagactttataataactggcagaataagaggaggaaaaaagttcagccc
aacagcaacacgaacagtcaggggcgtcaccgcaagtgcaagcggcgtatcacctccatt
catcacttaatacaccaccaccatcatcaccaccaccatcattaccacatcagcaatggg
agtccccggggtcccaggtctagtccggagatctgtgatgtggagatgaaaatcatgaag
ccaaagaatcaactaaggcttcctccagcatcccccagcctccaaagcatgtcccccaac
agtgaggccgtccacagtatctaccacgcggactgccacttagaggcgcctcagcggaaa
tcgagcaagtcttccaatgcctcgtcaaacataaaactgaatgctgggttgaatcacagt
aacatgaactatcccaccatcatgccctcccaagccaacaaaaccagccccgcaacacta
cccaaaggaaaaaggaatggcagcaatgcagtcagcttgctaagcagcccagtcagtatg
aaggcagattcgtttgggaagaccaaccacctagtcggagagcatggcctgtgcaggagt
tccagtaagctctccggtttgagcgtgccatgctccttgccaagccctcagccaagccct
ctactgtgcgaaatccagaactgcccgtactgtgccaaccttttggagaaccctgacttg
gagctcagcgactctgagagttgcgaatcggattctaacggggtctatgaattcacccag
gacttgaggcgtggagaccaaagagaccaggtgcagaaaggcagaaagctcaagactaag
ccaaaggaggctaacaaggtgtatctgctctgggaagagtttaccgtccgactgaaaagg
attgtggacagcaaatattttaaccgcgggattatgattgccatcctgatcaacacgctg
agcatggggattgagtatcatgagcagccagaagaactgactaacgccttggaaatcagc
aatattgtgtttacaagcatgtttgcgctggagatgctgctgaaactcttggcctttggg
atctttcaatacatcaagaatccatacaacatctttgatgggatcattgtcgtcatcagt
gtgtgggaaatcatcggtcagtcggacggaggtctgtctgtgcttagaacatttcgcctc
cttcgtgtgctgaagctggtacgatttatgccagcactgcggcgtcagctggtggtcctg
gtgaagacgatggacaacgttgccaccttttgcatgcttcttatgctcttcatctttata
ttcagcatccttggcatgcatctgtttgggtgtaagtttacttggactgcagacaccgga
gagacagtcaaagacagaaagaactttgattctttgctttgggcgattgtcaccgtcttc
cagattctcacccaagaagactggaacatggtcctatacaatggcatggcttccacctcc
tcctgggcagctctctactttgtggccctgatgacatttggaaattatgtgcttttcaac
ttgttagtagccatcttagtcgaaggcttccaagcagagggagatgcaacaaggtcagat
acagaggaggacaaggcttcaggcaactttgatgaagatctggagaaactgaaggagctt
cgtgctgcagaactgaagatgtactcactcgcagtgacacccaacggacacctggaccct
cggagttccatgcccccacctatcatcatgcgcaccgccgccaccccaatgcctacacca
aagagctccccttgcatggactcatcacatccgttcggcgattcaagaagggaaagtagc
gtctcgatagatccatcaatcgttgatcagaagtctttggcaagtctacgcagcacccct
tgtaccccctggggcacttacagcaactggggaagccgtcgctctagctggaatagtctg
ggtagagccccaagcatcaaaaagaagagccaatcaggggagagggagtccttactctct
ggtgaaggaaaggggagcacagatgatgactcagatgactgcaagtcaagcccagcggcg
agggtatctctccatcgcagggcaggttccctggacacgcggggctctttggatatccca
gatttcctgcaggtgcccacgttacgccattccctaagtgtcagtcctttggccatggtt
ccttcagattatcaagattgcaatgggaaaatgatgcacgtgcccagtgatctgttcgtt
cgggtggagaaacacagggaggatccgttggagtatgaagacgacatagaagatagttac
tgtttccgaatccgaaagatgttggagccatacaaacctacatggtgtaagacgcatgaa
gactggtccctctacatgttctcacctcaaaaccagttccggatgatgtgccaaaaagtc
attgcccacaagatgtttgaccacgtggttcttgtcttcatcttcttaaactgcatcacc
attgcacttgaacggcctgatattgaccccaatagcctggaacggatattcttgagtgtc
tccaattacatttttactgcaatctttgttttggaaatggcaattaaggtggtggccctg
ggctttgtctccggggagaacacttacctgcagagcagctggaacgtgcttgatgggatt
ctggtcttcgtttccatcatcgatatcgtcgtgtcccttgcctctgccgggggggcaaag
atcctgggagtcttgcgggtactgaggttgctgcggaccctgcgcccacttagggttatc
agccgagccccgggcctgaagttggtggtagaaactctcatttcctccctgaggcctatc
gggaacattgtccttatctgctgcgctttcttcatcatctttggcattctgggagtacag
cttttcaaaggcaagttctactactgcgaagggttagagacgaggaacatcaccaacagg
tcagagtgcacccgggcacggtacaaatgggtgcggcgcaaatacaactttgacaacctt
ggccaggcgctgatgtcgctctttgtcctctcctccaaagatggctgggtgaatatcatg
tacgatggcctggatgccgttgccacagatgttcagccagtcaaaaaccacaacccatgg
atgctcctgtacttcatctccttcctcctcatcgtcagcttcttcgtgctcaacatgttc
gtaggggtggtggtagagaacttccacaagtgccggcaacaccaggaggcggaagaggcc
cggcgccgggaggagaaacgcctccgccgcctggagaaaaagcgcaggagtaaggcgttg
tatatgtctgaggcccagcggagaccgtattacgcagagtactcgccggcgcgcctctac
atccacaccatgtgtaccagccactacctggatctctttatcacctgcattatttgtatc
aacgtcatcaccatgtccatggaacactacaaccaacccaagtccctggatgaagcttta
aaatactgcaattacgtgttcaccatcgtcttcgtgttcgaggccctgttcaagcttgtg
gcatttgggttccggaggttttttaaagacaggtggaaccaactggacttggccattgtt
ttgctctccatcatgggaatcacgttagaggagattgagattaacgcctcccttcccatc
aatccaactattatacgcatcatgagggtgctgaggattgctcgagtgttaaagctcctg
aaaatggccaccgggatgcgagctttgctggatactgttgtgcaagcgttacctcaggta
ggcaaccttggcctgctcttcatgctcctgttcttcatctacgcagccctgggagtggag
ctgttcggaaagctcgtgtgcaatgaggagaatccctgtgagggactcagccgacatgca
acatttgagaactttgggatggcttttctgaccctcttccgtgtttccacaggggataac
tggaatggcatcatgaaggacactctacgagagtgcaacagcgatgacaagaactgtctc
acctacctgcccgtcatctctcccgtctatttcgtaaccttcgtgctcattgcccagttt
gtcttggtcaatgtggtcgtggctgtgctcatgaaacatctagaggagagcaataaagag
gccaaagaagatgccgagatggatgcagagattgagatggagatgtctagggcactgaca
cctataagtggtggctgcactccagcttcagatggcaagggaactgagggagggcaagat
ccattaaagggggagctgctgaaacaagtggggggggcagtgtgccaagagaatgtgacc
ttagtgatcccagagtcaatggagggtgctgccctgctgaacgacgcagtccctgcttgc
tccatataccaacagcaggccctgccacttcccctccagccttgcgtccttgggcacgag
gatggggatttccaaaggagggatggatcgggctcccgaaacctactggctgtcaaaaag
atctcggtgtctaggatgctctccttacctaatgacagctacatgtttcgcccagtgcta
ccagcaaagtcatcttatcctttgcaagaagtggagaccactgaagataattcaccacat
gggtcgactgcttcactccactcccagccaggggacaataactcattgctgaatatacca
gtggagtgccagccacaggcctctgttagcaaccaccaggactctgccgacctgcctaaa
atcccaccgccacatacatcctcaagatctccaagtctaaacagatccctgagaagacag
gaggctatacgtatggactcagtggatcagggtggtgattctaaggaccttaatgtggaa
tctacagagagtttgcatctgggagctccatcagttactactttagttccaaatttgctt
tgcaccttaaatgtgtctctgcagggaaccccccagtcctcacctaggctatctccacag
cctagacattccagtgtcctcacacacaaccatgtatacagccaacacagtattccaagt
cggccttcgagtgtcagtagtggcaacagcaacccagaggaatctatgtttgagtcctca
gacctggctgatgaagaagtcagccatataaacagttcagcaaaagactggagaggatca
tctaataatagaagtcactctgtttctccattcatctcccaatcttcatctcctcctcct
ctttctccgtcactaaagaactgcaatagcacagtcagcctggcagggtccagcggcaaa
gataaagacttgaagaagttctatagtgttgatactcaaggattcttagctaagccctgc
tggggggatgaccaaaggaggcactcaattgagatctgcccttccattgatgatggagat
tcctgctttgacctgtccatggaggacaaacattgctcttctgttctcattcggtctgac
cccgaatacatcaatggagtccgacgaaagaagaagatgagtcccccttgcatttctata
gaccctcctatggaggatgaaggtggcacagcttcccgtaccaaagcatcagaaaacagc
atgatgttacgaagaaggaccccatcctgtgaatctactgcatacagggactctttagat
cttagtgacaaccagcttggggaccaaatatctaaaactgatagacgaacccaggtgccc
tgtcgcaatgaacacttgatcatacccagctactcgtttgacaaggtggacggaaacggc
ttctcagacctaatatctaacagtgggggttctactccgacgtccgttttcaatgaacct
gtgtctttagaaatgaaacaaaaagatcacaacgatctgagcggcgtttctaaagtttcg
ttgaaaactgcactagatcacgtatccaacccaacagaggacataatcgataacccatta
tag
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integrated database retrieval system
