Xenopus tropicalis (tropical clawed frog): 100497702
Help
Entry
100497702 CDS
T01011
Symbol
hdc
Name
(RefSeq) histidine decarboxylase isoform X3
KO
K01590
histidine decarboxylase [EC:
4.1.1.22
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00340
Histidine metabolism
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
100497702 (hdc)
Enzymes [BR:
xtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.22 histidine decarboxylase
100497702 (hdc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
100497702
NCBI-ProteinID:
XP_012814958
Xenbase:
XB-GENE-979207
UniProt:
F7BRU8
LinkDB
All DBs
Position
3:104987008..104999045
Genome browser
AA seq
640 aa
AA seq
DB search
MCLEGKELVDYICQYLSTVRERRVNPDVQPGYMRALLPDSAPVESESWERIFRDIEDIIM
PGVVHWQSPHMHAYFPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKM
LGLPCHFLHHYPSSKGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDSDDSQLNSRLI
AYASNQAHSSVEKAGLISLVKVRFLPVDENFCLRGDTLKAAVEEDRKNGLVPVFVCATLG
TTGVCAFDYLAELGPVCAREKLWLHIDAAYAGTAFLCPEFRTLMNGVDYADSFTFNPSKW
MMVHFDCTAFWVKDKYKLQQTFSVNPIYLRHANTGAATDFMHWQIPLSRRFRSLKLWFVI
RSFGVKNLQAHIRHGAELAKYFESLVTSDQMFEVPAKRHLGLVVFRLKGPNVLTEEVLAE
LTKSGKMYLVPATINDELIIRFTVTSQFTTRDDILRDWNLIRQSAINITNLHHGPVISSN
PTTSDNKNTLNIGNTKCDQENVFQKVTVQPKHEVFKPKDWVESISEDDLDPFDDCFSENE
LVVGKHRRASFLYKYCSVQEKKTARSLSCNSVPMHNAEKLVPRGEHQKDDSIVSNIPGKV
MILEKNAFRKLIKFYSVPSFPEFRIQCGLQFPCCPLQAFV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttggaagggaaagaactggtggattatatctgtcagtatctgagcactgtaaga
gagaggcgagtcaatccggatgtacagccaggctatatgcgagctctgctgccagacagt
gctccagtggaatctgaaagctgggagagaatcttcagggatattgaagacatcataatg
ccaggggtggtacattggcagagtcctcacatgcatgcttactttcctgccctgacatct
tggccttccctgctaggagacatgcttgctgatgcaataaactgcttaggatttacatgg
gcttccagtccagcttgcactgagctggaaatgaatgtgatggactggttggctaaaatg
ctgggtctcccttgccattttctccatcattatccaagcagcaaaggaggcggtgtactg
cagagtacagtgagtgaatcaaccttgatagctttgctggctgcaaggaagaacaagatt
ctggaaatgaaaacctctgaaccagattcagatgactcccagctgaattccagacttatt
gcatatgcttccaaccaggctcattcatccgtggaaaaggcaggtttgatttctctagta
aaagttcgatttttgccagtggatgaaaatttctgtcttcgtggtgacaccctgaaagct
gcagtggaagaagacagaaaaaatgggcttgtccctgtctttgtatgtgccacgttgggt
acaactggtgtctgtgcatttgactatttggcagaactgggaccagtttgtgccagagaa
aagctgtggctgcacattgatgcggcgtatgcaggtacagccttcttgtgcccggagttc
aggacattgatgaatggagtagactatgctgattcatttacattcaatccatccaagtgg
atgatggttcattttgactgcactgctttttgggtgaaagataaatacaaattacagcaa
actttcagcgtcaaccctatttacctcaggcatgcaaacacaggggctgctactgacttc
atgcattggcagattcccctgagccgccgctttcgctcgttaaagctctggtttgtcatt
aggtcgtttggagtaaaaaatctgcaggcgcacatcaggcatggggcagagctagccaaa
tattttgagtcattggtgactagtgaccagatgtttgaagtacctgcaaaacggcacctt
ggactagttgttttccgattaaagggtccaaatgttttgacagaggaagtcttggcagag
cttaccaagtctggaaaaatgtaccttgtaccagccactatcaatgatgagcttattata
cgtttcaccgtcacctctcagttcacaaccagggatgatattttgagggattggaacctg
atacggcagagtgccatcaatatcactaacctgcaccatggacctgttatctctagcaac
cctaccactagtgacaacaaaaatacactgaatataggcaacaccaaatgtgatcaggaa
aatgtattccagaaggtcactgtccaaccaaaacatgaggtctttaaacctaaagactgg
gtagaatcaatctctgaagatgacctagatccctttgatgactgcttctcagaaaatgag
ctggtagttggcaaacataggagggcatctttcctgtacaagtattgctctgtgcaagaa
aagaaaacagcccgctcccttagctgcaacagtgttccaatgcataatgctgaaaagctt
gtgccacgaggggaacatcagaaagatgacagcattgtttccaacatcccaggaaaggtg
atgattctagaaaagaatgcctttagaaagttaattaagttctacagtgtaccaagtttt
ccggaattccgaattcaatgtggccttcagtttccttgctgtcccttacaggcatttgtt
taa
DBGET
integrated database retrieval system
