Xenopus tropicalis (tropical clawed frog): 100497789
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Entry
100497789 CDS
T01011
Symbol
fxn
Name
(RefSeq) frataxin, mitochondrial isoform X2
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
100497789 (fxn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100497789 (fxn)
Enzymes [BR:
xtr01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
100497789 (fxn)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
100497789 (fxn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
ORF_12_N
Caskin-tail
Motif
Other DBs
NCBI-GeneID:
100497789
NCBI-ProteinID:
XP_002934226
Xenbase:
XB-GENE-984730
UniProt:
A0A6I8R145
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Position
1:126888736..126894098
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AA seq
206 aa
AA seq
DB search
MSKLVRTLARKVTVSHHIWTASNCRVLCKWQHLETAGSSSSQYRGFQIFKIQTLQSFSHL
LDPATRNSLLLCRRNAGTLSNTSSLDETTYEKLAEETLDSLAEFFEDLADQPFTPEDYDV
SFGNGVLTVKLGGDMGTYVINKQTPNKQIWLSSPTSGPKRYDWTGRTWVYSHDGVALHEL
LAKELSAVLKNKIDLSNLLYSHGNLK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcttgtacggactctcgcacgaaaggtgacggtgtcgcatcacatatggact
gcatccaattgtagagtactgtgtaaatggcaacatctggagacggctgggagttcgagc
agtcagtaccggggctttcaaatatttaagatccaaactcttcagtcttttagccacttg
ctggacccagctacaagaaatagtctgcttttatgtagaagaaatgcaggaaccctttca
aatacaagctcacttgatgaaacaacctatgagaagctggcagaagagactcttgactct
ttagcagagttctttgaggatttggctgaccaacccttcacaccagaagattatgatgtt
tcttttgggaatggtgtactcacagttaaactgggtggagacatggggacctatgtgatc
aacaaacaaactccaaacaagcagatatggctgtcttctcccacaagtgggcccaaacga
tacgactggactggaagaacgtgggtttattctcatgatggagttgcacttcacgagctg
ttggcaaaagaattatctgcagtactgaaaaataaaatagatctatcaaatttgctttat
tctcatgggaatttgaaatag
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