Xenopus tropicalis (tropical clawed frog): 394461
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Entry
394461 CDS
T01011
Symbol
esr1
Name
(RefSeq) estrogen receptor precursor
KO
K08550
estrogen receptor alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
394461 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
394461 (esr1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
394461 (esr1)
Nuclear receptors [BR:
xtr03310
]
3. Estrogen like
3A. Estrogen receptor
394461 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Motif
Other DBs
NCBI-GeneID:
394461
NCBI-ProteinID:
NP_988866
Xenbase:
XB-GENE-482193
UniProt:
Q6W5G9
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Position
5:complement(48771409..48850097)
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AA seq
543 aa
AA seq
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MLFFCLFIIMLSIPVASVFIAAAAAPVYSSASLSYAASSETFGSSSLTGLHTLNNVPPSP
VVFLQTPQLSPFIHHHGQQVPYYLESEQGTFAVREAAPPTFYRSSSDNRRQSGRERMTSA
NDKGPPSMESTKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCT
IDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQKNDVTPSEIRTT
SIWVNPSVKSMKLSPVLSLTAEQLISALMEAEPPIVYSEHDSTKPLSEASMMTLLTNLAD
KELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMVGLIWRSVEHPGKLSFAPNLLLD
RNQGRCVEGLVEIFDMLVTTATRFRMMRLRGEEFICLKSIILLNSGVYTFLSSTLESLED
TDLIHIILDKIIDTLVHFMAKSGLSLQQQQRRLAQLLLILSHIRHMSNKGMEHLYSMKCK
NVVPLYDLLLEMLDAHRMHTPKDKATAQEEDSRSPLTTTANGASPCLQPFYTSTEEVSLQ
STV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttttttgcttgttcattatcatgttgtctattcctgtggcgtctgttttcatt
gctgctgctgctgcaccggtgtatagctctgctagtctcagctatgctgccagctcagag
acattcggatctagcagtctgactgggctacatactttgaacaatgtgcctccaagtcct
gtagtgttccttcaaactccacagctatcaccgtttatccaccaccatggccaacaagtg
ccatactatttggagagtgaacagggaactttcgcagtaagggaagcagcacccccaaca
ttttacaggtcaagttcagacaacagaaggcagagtggaagggaacgcatgacatcagct
aatgataagggccctccatccatggaatctaccaaggaaacacgatattgtgctgtttgc
agtgactatgcatctgggtaccattatggcgtctggtcctgtgaaggttgcaaagctttt
tttaaaagaagcatacaaggacataatgactatatgtgccctgcaaccaatcagtgcacc
atagacaagaacagaagaaaaagctgccaagcctgccgactgagaaaatgctatgaagtg
ggcatgatgaaagggggtattcgaaaggatcgcaggggaggacgtatgttgaaacataag
cggcagaaagaagaacaagagcagaaaaatgatgtgactccatcagagattaggacaaca
tccatctgggtgaatccttcagtgaaaagcatgaagctgagcccagtactgtcgcttaca
gctgagcagcttatcagtgccttaatggaggcggagccacctatagtatattctgagcat
gactcaaccaaaccactcagtgaagcttccatgatgactctgcttacaaaccttgctgat
aaggagctagtacacatgattaactgggcaaagagggtgccagggtttgtggacttaaca
ctccatgaccaggtgcaccttctggaatgtgcttggctggagatccttatggtcggttta
atctggagatctgtggaacatccaggcaaactttcatttgcaccaaatctgttactggac
aggaatcagggacgctgcgtggaaggcttagtggagatttttgacatgctggtcactaca
gcgacaagatttcgcatgatgaggttacgtggggaagaatttatatgtctgaaatctatc
attcttctaaattctggtgtttatactttcctgtctagcacattagaatctcttgaagat
acagacttaattcatattattttggataaaataatagacacattagtccactttatggct
aaaagtgggctctctctgcagcagcagcaaaggcgactggctcagcttcttctcattctt
tcacacataaggcatatgagcaataagggcatggaacacttatacagcatgaagtgtaag
aatgttgtccccttatatgatttactgttggaaatgctggatgcccatcgcatgcacaca
ccaaaggacaaagcgaccgctcaggaggaagatagccggagtccgcttaccactactgca
aatggtgcatcaccttgcttacagcccttttacacaagcacggaagaagtgagcttacaa
agcacagtatga
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