Xenopus tropicalis (tropical clawed frog): 548531
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Entry
548531 CDS
T01011
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta precursor
KO
K04816
nicotinic acetylcholine receptor delta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
548531 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
548531 (chrnd)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
548531 (chrnd)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
548531
NCBI-ProteinID:
NP_001015814
Xenbase:
XB-GENE-989975
UniProt:
Q5EB41
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Position
5:101852549..101868484
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AA seq
521 aa
AA seq
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MAGIWICLLLPIFSYFQGCLSESEEERLLNHIFGERGYRKELRPVEHTGETVNVSLALTL
SNLISLKEADETLTTNVWVELGWYDKRLAWDMEEFHHINIIRVPPDMVWQPQLILENNNN
GVFEVAYYSNVLVNSDGFMYWLPPAIFQTSCSINVNYFPFDWQNCSLKFSSLTYNAKEIN
LQLRQDQDEESQRNYPVEWIIIDPEGFTENGEWEIVHIPAKKNIDRSLTPESTKYQDITF
YLIIKRKPLFYIINILAPCVLIALMANLVFYLPADSGEKMTLAISVLLAQSVFLLLISQR
LPETSFAIPLISKYLMFIMVLVTIVVVSCVIVLNLHFRTPSTHVITERMKEIFLNKLPRI
LHMSRPAEPEPEPWSGVLLRRSSSVGYIVKAEEYYSVKSRSELMFEKQSERHGLTSRATP
ARVNPLNSNNSQDQLYGEIKPAIDGANFIVKHMRDKNDYNEEKDNWYRIARTVDRLCLFL
VTPVMIIGTLWIFLGGAYNLPPSLPFPGDPFDYNKEHKRLI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatatggatctgccttctattgccaatttttagctactttcaaggatgtctc
tctgagagtgaagaggagcgtttgctaaatcacatttttggtgagcgaggctacagaaag
gaactgcggccagtggaacatactggtgaaacagtgaatgtttctttggctctgacactc
tctaacctgatttccctgaaagaagctgatgaaacccttaccacaaacgtttgggtagaa
ctgggctggtatgacaaaaggctggcatgggatatggaagagtttcatcatataaatatt
attagggttccacctgacatggtgtggcagcctcagctcatcctggaaaacaacaacaat
ggtgtctttgaggtggcttattacagcaacgtcctggtaaacagtgatggctttatgtat
tggctgccccctgctatattccaaacctcatgctctattaatgtcaactactttccattt
gactggcagaactgttctttaaagttcagctccttgacttacaatgcaaaagaaataaat
ttacagctcaggcaggaccaggatgaagagtcccaaagaaactatccagtggaatggatt
attattgatcctgaagggttcacagagaatggtgaatgggagatagtccatattccagcc
aagaagaatattgacagaagtttaacccctgagagcaccaagtaccaggacatcactttc
taccttataataaagcgcaaaccccttttctatataattaacattctagctccttgtgtg
ctcattgcactaatggctaatctggtcttctatctaccagctgacagtggggagaaaatg
accttggcgatatctgtccttctggctcagtctgtcttccttttgcttatctcacagcgt
cttccagagacttcttttgccattccactcattagcaagtatctgatgtttatcatggtc
ctagtgacaattgtggttgtaagctgcgtcattgtgttgaacttacacttcaggacaccc
agcacgcatgtaataactgagcggatgaaagagatctttcttaacaaactgccccgcatt
ctgcacatgtctcggccagcagaaccagagcccgagccttggagtggagtccttttgagg
cgtagtagctctgtggggtacattgtaaaggcagaggaatattacagtgtcaagtccagg
agtgaactcatgtttgaaaagcaatcggagcgccacggtttaactagtcgagccacccct
gcacgagtcaatccattgaactcaaacaactcacaggaccaactttatggagagataaaa
ccagctattgatggagcaaattttattgtcaaacacatgagggacaagaatgattataat
gaggaaaaggataactggtatcgcattgctcggactgttgaccgcttgtgcctcttcctt
gtgacccctgtaatgatcattgggactctgtggatatttttgggaggtgcttacaaccta
cctccttcccttccattccctggtgacccctttgattacaataaagaacacaaaagactg
atatag
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