Xenopus tropicalis (tropical clawed frog): 548712
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Entry
548712 CDS
T01011
Symbol
glb1l
Name
(RefSeq) beta-galactosidase precursor
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00052
Galactose metabolism
xtr00511
Other glycan degradation
xtr00531
Glycosaminoglycan degradation
xtr00600
Sphingolipid metabolism
xtr00604
Glycosphingolipid biosynthesis - ganglio series
xtr01100
Metabolic pathways
xtr04142
Lysosome
Module
xtr_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
548712 (glb1l)
09103 Lipid metabolism
00600 Sphingolipid metabolism
548712 (glb1l)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
548712 (glb1l)
00604 Glycosphingolipid biosynthesis - ganglio series
548712 (glb1l)
00511 Other glycan degradation
548712 (glb1l)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
548712 (glb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
548712 (glb1l)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
548712 (glb1l)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
548712 (glb1l)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
548712
NCBI-ProteinID:
NP_001015958
Xenbase:
XB-GENE-964696
UniProt:
Q28E48
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All DBs
Position
6:58611942..58638528
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AA seq
648 aa
AA seq
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MMWLRTFLRIFLLMVPYGSVSVSTTSSRTFEIDFEHNCFRKDGQPFRYISGSIHYSRVPQ
YYWKDRLLKMKMAGLDAIYTYVPWNFHETKPGVYNFSGDHDIESFLKLANEIGLLVILRA
GPYICAEWDMGGLPAWLLAKESIVLRSSDPDYLQAVDNWMGVFLPKMKPFLYHNGGPIIS
VQVENEYGSYFTCDYNYLRHLLQLFRHHLGDEVVLFTTDGSGLQYVRCGTIQGLYTTVDF
GPGSNVTETFSVQRYCEPKGPLVNSEFYTGWLDHWGEPHSVVATEMVTKSLDEILAHGAN
VNMYMFIGGTNFGYWNGANTPYAPQPTSYDYDAPLSEAGDLTDKYFAVREVIKKYKQIPE
GPIPPTTPKYAYGEIKMEKVKTVTEALDILASHGAIQGTYPLTFDQMKQYFGFVLYRTTL
PINCSNPTTLTTLSNGVQDRAYVTVNGVPQGVLERDKQTAINVTGVAGAELDLLVESMGR
VNFGRYNNDFKGLLTNVTLNGELLVNWTMYPLDIDSAVNGGLLSTIHIPYASAFSAPMFY
KGSLIIPTGIPDLPQDTFIQFPGWTKGQIWINGFNLGRYWPVRGPQVTLYVPRSILTTTL
VNNITVLELENSPCNSGKCVVEFVDKPVLNKVKQIVDEHKFSKEKFLK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggctgcggacttttttgcgcatttttctattgatggttccatatggctcagtc
agcgtgagtacaacatcctcaagaacatttgagatagattttgaacacaattgttttcgg
aaagatgggcaaccttttcgttacatatctggaagtattcattattctagagttccacag
tattactggaaagaccgcctactgaaaatgaagatggcaggattagatgctatttacact
tatgtaccatggaattttcatgagacaaagccgggagtttacaacttttctggagatcat
gatattgagtcattcttgaaacttgctaatgaaattgggctgctggtgatcctgagagca
ggtccttacatatgtgcagaatgggacatgggaggtttgcctgcatggcttttagcaaaa
gaatcaattgtccttcgaagttctgatccagattaccttcaagctgtggataattggatg
ggagtgtttctgcccaagatgaaaccttttttgtaccacaatggaggcccaattataagt
gtccaggttgaaaatgagtatggcagctattttacttgtgattacaattatcttcgacat
ctattgcaacttttccgtcatcacttaggggacgaggtggttttattcacaactgatggt
tctgggctacagtatgtgaggtgtgggacaattcaaggcctatatacaacagtagatttt
ggaccaggttccaatgttactgaaacattttcagttcagaggtattgtgaaccaaaagga
ccattggttaactcagaattctacactggatggctggatcactggggtgaaccacactct
gtagtagcaacagagatggtaaccaagtcactggatgaaatcttggctcatggagcaaac
gttaacatgtatatgtttataggaggcactaattttggatactggaatggtgccaacaca
ccatatgcaccacagcctaccagttatgattatgatgcccctttatctgaagctggggat
ttgactgataagtattttgcagtcagagaagttataaaaaagtataaacagataccagag
ggtcctattccaccaacaaccccaaaatatgcatatggtgaaattaaaatggaaaaggtg
aaaacagtcactgaggctttggatatattggcctcacatggagcaatacagggtacttat
cctttaacatttgatcagatgaaacagtattttggctttgtgctgtacagaacaacatta
ccaataaattgcagtaatccaacaacattgactacattatctaatggagtgcaggaccgt
gcttacgttacagttaatggggttccacaaggtgttcttgaaagagataagcagacagct
ataaatgtaactggagtggcgggagcagaactggacttgctggtggaaagtatgggcagg
gttaattttggaagatacaataatgattttaagggcttgcttaccaatgtaaccctcaat
ggagaactgcttgtgaactggacaatgtaccctctagacatagatagtgctgttaatggt
gggcttttgtccaccattcatattccatatgcatctgccttttcagctccaatgttttac
aaaggaagcctaattattcccactggaattccagatttaccccaggatacctttattcag
ttcccaggatggacaaagggacaaatttggatcaatggatttaacctgggacggtactgg
ccagtgagaggtcctcaagttactttgtatgttccaagaagcattttaacaacaactcta
gtaaacaacattacagtgctagaactagaaaattccccttgcaacagtgggaaatgtgtt
gtggagtttgtggataagccagttcttaataaagtaaaacaaatagttgatgaacacaag
ttcagcaaagaaaaatttctcaaatga
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