Xenopus tropicalis (tropical clawed frog): 549973
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Entry
549973 CDS
T01011
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
xtr03420
Nucleotide excision repair
xtr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
549973 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
549973 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
549973 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
549973 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
549973 (cdk7)
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549973 (cdk7)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
549973 (cdk7)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
549973 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
549973 (cdk7)
Protein kinases [BR:
xtr01001
]
Serine/threonine kinases: CMGC group
CDK family
549973 (cdk7)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
549973 (cdk7)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
549973 (cdk7)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
549973 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
FTA2
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
549973
NCBI-ProteinID:
NP_001017219
Xenbase:
XB-GENE-485507
UniProt:
Q28II8
LinkDB
All DBs
Position
1:complement(186221595..186236300)
Genome browser
AA seq
352 aa
AA seq
DB search
MEGIMARGVDVRSRSKQYEKLEFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEAKDG
INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPAHI
KSYMLMTLQGLEYLHHLWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRIYTHQVV
TRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE
EQWPGMSSLPDYVAFKSFPGTPLHHIFIAAGDDLLELLQGLFTFNPCARCTASQALRKRY
FSNRPAPTPGSLLPRPNCSVEALKEQQNLNLGIKRKRTEGMDQKDIAKKLNF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggggataatggcgagaggggtggatgtgcgctcccgttccaagcagtatgagaag
ctggagttcctgggggaaggccagtttgccacagtttataaagcaagagacaagaataca
gatagaattgtggccattaaaaagattaaactgggacatagagcagaggctaaagatggt
ataaacagaacagcactcagagagataaagctgctgcaggagttaagccatcctaatatc
attggccttctggatgcttttggacacaaatcaaacataagcctggtgtttgattttatg
gagacagatcttgaggttataataaaagataccagcttggtattaactccagctcatatt
aaatcatacatgctgatgactctgcagggcttggaatacttacaccacctctggatcctg
cacagagacttgaagccaaataatttgctgctggatgaaaatggggtccttaaacttgct
gattttggtcttgcaaagtcatttgggagtccaaacagaatatatactcatcaagtagta
acaaggtggtaccgatctcctgagttgctgtttggtgctagaatgtacggtgtgggagta
gacatgtgggcagttggctgcatcttagcagagctgctacttcgggtgccctttttgcct
ggggactctgatctagaccaacttacaagaatatttgaaactttgggaacaccaacagaa
gagcaatggccgggcatgtccagccttccagactacgttgcctttaaaagttttccaggg
acaccgctccaccatatttttattgcagctggtgatgatcttcttgaacttttgcaaggc
ttatttacctttaatccatgtgcacgatgcacagcatcccaggcactcagaaaaaggtat
tttagcaacagaccggcgccaaccccaggaagccttttgccaagaccaaattgttctgta
gaagcgttaaaggagcagcaaaatctcaatctaggcataaagagaaagcggacagaaggc
atggatcaaaaagacattgctaagaagttgaatttttga
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