Xylophilus sp. GOD-11R: R9X41_22130
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Entry
R9X41_22130 CDS
T09600
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg00860
Porphyrin metabolism
xyg01100
Metabolic pathways
xyg01110
Biosynthesis of secondary metabolites
xyg01120
Microbial metabolism in diverse environments
xyg01240
Biosynthesis of cofactors
Module
xyg_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
R9X41_22130 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xyg04147
]
R9X41_22130 (hemB)
Enzymes [BR:
xyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
R9X41_22130 (hemB)
Exosome [BR:
xyg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
R9X41_22130 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WPB59529
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All DBs
Position
4789592..4790608
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AA seq
338 aa
AA seq
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MPISTPTPYPLSRPRRLRRDTFSRNLVREHALTAHDLIYPVFVLDGQGRRETVASMPGVE
RLSLDLLLPVAEECVSLGIPALALFPVIDPALKTPDGVEATNPDGLIPTVVRGLKQRFPE
LGVMTDVALDPYTSHGQDGLLDEHGYVINEVTIDMLVRQALVQAQSGVDIVAPSDMMDGR
IGAVRAALEKDSHIHTRIMAYSAKYASAFYGPFRDAVGSAANLGKGNKLTYQMDPGNGDE
ALREVALDISEGADMVMVKPGMPYLDIVRRVKDEFRVPTFAYQVSGEYAMLQAAFANGWL
NRDAATLEALLAFKRAGADGVLTYFAIQAARLLRESQR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcagcacccccaccccctacccgctttcccgcccgcgccgcctgcgccgcgac
accttcagccgcaacctcgtgcgcgaacacgccctgacggcgcacgacctgatctacccc
gtcttcgtgctcgacggccagggccgacgcgagacggtcgcctccatgcccggcgtagag
cgcctgagcctcgacctgctgttgccggtcgccgaggaatgcgtgtcgctcggcattccg
gcgctcgccctgttcccggtgatcgacccggcgctcaagacgcccgacggcgtcgaggcg
accaacccggacggcctgatcccgaccgtcgtgcgcggcctgaagcagcgctttcccgaa
ctcggcgtgatgaccgatgtcgccctggacccctacaccagccacggccaggacggcctg
ctcgacgagcacggctacgtcatcaacgaagtcaccatcgacatgctggtgcgccaggcc
ctggtgcaggcgcagagcggcgtggacatcgtggcgcccagcgacatgatggacggccgc
atcggcgcggtgcgcgccgcgctcgagaaagacagccacatccacacccggatcatggcc
tacagcgccaagtacgccagcgccttctacggcccgttccgagacgcggtcggctcggcc
gccaacctgggcaagggcaacaaactcacctaccagatggacccgggcaacggcgacgaa
gccctgcgcgaagtcgcgctcgacatctccgaaggcgccgacatggtcatggtcaagccc
ggcatgccctacctcgacatcgtgcgccgggtgaaggacgagttccgggtgccgaccttc
gcctaccaggtcagcggcgagtacgcgatgctgcaggccgcattcgccaacggctggctg
aaccgcgatgccgccacgctcgaagcgctgctcgccttcaagcgcgccggtgccgacggt
gtgctgacctatttcgcgatccaggccgcgcgcctgctgcgcgaatcgcagcgctga
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