Yersinia canariae: F0T03_00370
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Entry
F0T03_00370 CDS
T06446
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
yca
Yersinia canariae
Pathway
yca00540
Lipopolysaccharide biosynthesis
yca01100
Metabolic pathways
yca01250
Biosynthesis of nucleotide sugars
Module
yca_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
F0T03_00370 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yca01005
]
F0T03_00370 (rfaD)
Enzymes [BR:
yca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
F0T03_00370 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
yca01005
]
Core region
F0T03_00370 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
Motif
Other DBs
NCBI-ProteinID:
QHB30813
UniProt:
A0A857ESP2
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All DBs
Position
complement(77540..78472)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFVASI
VAGDDMGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRAIPFLYASSAATY
GGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSENFKRDFIYVGDVADVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAVVDFHQSGPVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVK
EYLAWLNRSV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggtttcattggcagcaacatcgttaaggcactgaat
aatatcggctataaagatattctggttgtagataacctgaaagacggcaccaaattcgtc
aatctggttgatctggatatcgctgattacatggataaagaagattttgttgccagcatt
gttgccggtgatgatatgggtgatattgatgcgattttccacgagggtgcctgttcttcc
accactgagtgggatggcaagtacatgatggataacaactatcagtattcaaaagatatc
ctacacttctgtctggatcgcgctattccgttcctatacgcctcctccgctgccacctat
ggcgggcgtactgacaattttattgaagatcgtcagtatgaacagccacttaacgtttat
ggctattccaaattcctatttgaccaatatgtgcgcgaaattctgccacaagctgattca
cagatttgcggattccgttatttcaatgtttatggcccacgcgaaggccataaaggcagc
atggcgagtgttgctttccatctgaataaccagatcaatgcaggcgaaaatcctaaattg
ttctccggcagcgaaaacttcaaacgcgactttatttatgttggcgatgttgccgacgtt
aacctgtggttctggcaaaacggtgtctcaggtattttcaactgcggtacaggtcgcgcg
gaatctttccaggctgtggccgatgcagtggtggatttccaccaaagtgggccggtggaa
tacattgaattcccagaaaaattgaaaggccgttatcaggcatacacgcaagctgatctg
actaatttgcgtgctgccggttatgacaagccgttcaaaacggtcgccgaaggcgtcaaa
gaatacttggcctggctcaatcgctcagtctaa
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