Yersinia enterocolitica LC20: LC20_01361
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Entry
LC20_01361 CDS
T03179
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
yel
Yersinia enterocolitica LC20
Pathway
yel00730
Thiamine metabolism
yel01100
Metabolic pathways
yel01240
Biosynthesis of cofactors
yel04122
Sulfur relay system
Module
yel_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LC20_01361
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LC20_01361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_01361
Enzymes [BR:
yel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LC20_01361
Transfer RNA biogenesis [BR:
yel03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LC20_01361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AHM72615
UniProt:
A0A7U4K0G3
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All DBs
Position
1226267..1227718
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AA seq
483 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKNLEDDTLAVVRHWDHIEIRTKDDNL
GPQICDALTRVPGIHHILEVEDRSYTDMHNIFEQTLAAYRETLVGKTFCVRVKRRGKHEF
SSGDVERYVGGGLNQHIESAKVKLTHPQVTVHLEIDQDKLILIKARHEGLGGFPIGTQED
VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRF
VAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLT
NLRLIDNASDTLILRPLISHDKEHIINLAREIGTEDFAKTMPEYCGVISKSPTVKAVKAK
IEEEESHFDFSILDRVVSEAKNVDIREIAEQSREQLVEVETVAELTDSDVLLDIRAPDEQ
DEKPLKLDGIEIRALPFYKLSSQFADLDQSKTYLLYCDRGVMSRLQALYLREQGYSNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaagagtcaatctgtgcgattg
cgctttattaagatcctcacaaccaatatccgcaacgtattgaaaaaccttgaggacgat
actcttgcggttgttcgtcattgggatcatattgaaatccgcaccaaagatgacaatctc
ggcccacagatttgtgatgcgctaacccgcgttccggggatccaccatattcttgaagtg
gaagaccgcagttacaccgacatgcacaatatctttgagcaaacgctggcagcctaccgt
gaaacactggtcgggaaaactttctgtgtccgggtgaaacgccgtggtaagcatgaattt
tcttctggtgatgttgagcggtacgtcggtggcggtctgaatcaacatattgaaagtgcc
aaagtgaaactgacccatccgcaggtcactgtgcatttagagattgatcaagacaaactg
atacttatcaaagcgcgtcatgaaggattaggtggcttcccgattggtacacaggaagat
gttttatccctgatttccggtggttttgactcgggtgtctccagctatatgctgatgcgc
cgggggtgccgggtgcattattgtttcttcaatcttggtggctccgcccatgaaattggc
gtgaagcaagtcgctcattatttgtggaatcgttttggcagttcccatcgggtgcgtttt
gttgctatcgattttgagccggtagtgggtgaaatcctcgaaaaagtcgaagacggtcag
atgggcgtggtgttaaaacgcatgatggtgcgtgctgcgtctcaggttgctgaacgttac
ggtgttcaggcgttggtgaccggggaagcgctggggcaagtgtccagccagacactgact
aacttgcgcttgattgataatgcctctgacactcttatcttgcgcccgctgatttcgcac
gacaaagagcatatcatcaatttggcacgggaaatcggcaccgaagatttcgcgaaaacc
atgccagaatattgcggggttatttccaaaagcccaacagtgaaagcggttaaagccaag
attgaagaagaagagtctcactttgatttctccattctggaccgggtggtcagtgaagct
aaaaacgtcgacatccgtgaaattgccgagcaaagtcgtgagcagctggttgaagttgaa
accgttgccgaactgacagacagcgacgtattgcttgatatccgcgcgccagatgagcag
gatgaaaagccactcaagctggatggtattgaaatacgggcgctacccttctataagctg
agttcgcaatttgccgatttagaccagagcaaaacctacctgttgtattgcgaccgcggt
gtgatgagccgtttgcaggcgctttatttgcgtgagcaggggtatagtaatgtgaaagtg
taccgtccataa
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