Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1112
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Entry
YE105_C1112 CDS
T01480
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00730
Thiamine metabolism
yep01100
Metabolic pathways
yep01240
Biosynthesis of cofactors
yep04122
Sulfur relay system
Module
yep_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YE105_C1112
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
YE105_C1112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yep03016
]
YE105_C1112
Enzymes [BR:
yep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
YE105_C1112
Transfer RNA biogenesis [BR:
yep03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
YE105_C1112
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ADZ41608
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Position
1330270..1331721
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AA seq
483 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKNLEDDTLAVVRHWDHIEIRTKDDNL
GPQICDALTRVPGIHHILEVEDRSYTDMHNIFEQTLEAYRETLVGKTFCVRVKRRGKHEF
SSGDVERYVGGGLNQHIESAKVKLTHPQVTVHLEIDQDKLTLIKARHEGLGGFPIGTQED
VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRF
VAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLT
NLRLIDNASDTLILRPLISHDKEHIINLAREIGTEDFAKTMPEYCGVISKSPTVKAVKAK
IEEEESHFDFSILDRVVSEAKNVDIREIAEQSREQVVEVETVAELADTDVLLDIRAPDEQ
DEKPLKLDGIEVRTLPFYKLSTQFADLDQSKSYLLYCDRGVMSRLQALYLREQGYTNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaagagtcaatctgtgcgattg
cgcttcattaagatcctcacaaccaatattcgcaacgtattgaaaaaccttgaggacgat
accctcgcggtggttcgtcattgggatcatattgaaatccgcactaaagatgacaatctt
ggcccacagatttgtgatgccctgacccgtgttccagggattcaccatattcttgaagtg
gaagatcgcagctacaccgacatgcacaatatttttgagcaaacgctggaagcttatcgc
gaaacactggtcggaaaaacattctgtgttcgggtaaaacgtcgcggtaaacatgaattt
tcatcgggtgatgtcgagcgctatgttggcggtggtctgaatcaacatattgaaagtgcc
aaagttaaactgacccatcctcaggtgaccgttcatttagaaattgatcaggacaaactg
acactgatcaaggcgcgtcatgaaggattgggcggcttcccaattggtacgcaggaagat
gttttgtctctgatttcaggcggttttgactccggtgtgtccagctatatgctgatgcgt
cgtggttgtcgcgtgcattattgtttcttcaatcttggtggctctgcccatgagattggg
gtgaagcaagtggctcattatctgtggaatcgttttggtagctcccatcgggtgcgtttt
gttgccatcgatttcgaaccggtggtgggcgaaatcctcgaaaaagtcgaagatggtcag
atgggcgtggtgttgaaacgtatgatggtgcgcgcagcgtctcaggtggcagagcgctat
ggcgtgcaggcgctagtcaccggtgaagcactggggcaggtatccagccagacactgacc
aatttgcgtttaattgataatgcctctgacaccttgatcttgcgcccgctgatttctcat
gacaaagagcacatcatcaatctggcgcgtgaaatcggtaccgaagatttcgctaaaacc
atgccagaatattgcggtgtgatttcaaaaagcccgacagtgaaagcggttaaggccaag
attgaagaagaagaatctcactttgatttctccattttggatcgagtggtcagcgaagcc
aaaaacgtcgatatccgtgaaatcgccgaacaaagtcgtgagcaggtagttgaagttgaa
actgtggctgaattggcggataccgatgtactgctggatattcgagctcccgatgagcaa
gatgaaaagccactgaagctggacggaattgaagtccgtacattgccgttttataaactg
agtacgcaatttgccgatttggatcagagcaagagctatctgttgtattgcgaccgcggt
gtaatgagccgtttacaggcgttgtatctgcgtgagcagggctatacaaacgtaaaagtt
taccgcccatag
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