KEGG   Yersinia enterocolitica WA: CH47_2533
Entry
CH47_2533         CDS       T03643                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
yew  Yersinia enterocolitica WA
Pathway
yew00740  Riboflavin metabolism
yew01100  Metabolic pathways
yew01110  Biosynthesis of secondary metabolites
yew01240  Biosynthesis of cofactors
yew02024  Quorum sensing
Module
yew_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:yew00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CH47_2533 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH47_2533 (ribD)
Enzymes [BR:yew01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CH47_2533 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CH47_2533 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AJI83916
UniProt: A0A485DQP0
LinkDB
Position
complement(2696487..2697596)
AA seq 369 aa
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA
GEKARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAG
VEVDHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQD
VQRFRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALRQPVRIIVDSHNRVT
PQHKVIQQDGPCWLARVEADEQSWPNNVEQLLLPRHGNGVDLVLLMMQLGKRQINSVWVE
AGPQFAGALLQAGVVDELILYIAPKLLGSDARGLCQLTGLTQLSDAPEFVFSEVRQVGPD
LRLRLKPKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcagcccgatgaattctatatggcccgtgcctttgagttggcgcggctagggcgtttt
actacgtcaccgaaccccaatgtcgggtgtgtgctggtgcgcgatggcgagattgtcggt
gagggctatcatttgcgtgctggcgaacctcatgccgaggtgcatgctttacggatggcg
ggtgaaaaagcgcgtggcgctaccgcctatgtcacccttgagccatgtagccaccacggg
cgtacgccgccatgtgctgatgctttgcttactgccggtgtaaaacgcgtggtagccgcg
atgcaggatcctaatccgcaagttgccgggcgcgggttatataaattaaaacaggctggg
gttgaagttgaccacggtttgatgctggcggaagccgaagcggttaatctcggcttcttg
aaacggatgcgcacgggttttccttatctgcaattgaaaatggctgcatccctggatggt
cgcaccgcaatggcctcgggtgaaagccagtggattacctcgccacaagcgcgtcaggat
gtgcagcgttttcgggcgcaaagctctgctatccttagcaccagtgccaccgtattggct
gatgatcctgcgctaaccgtgcgctggcaggagctggatgcacaaacccaggcgctgtac
cctcaagatgcactgcgccagccggttcgaattattgtcgatagccataaccgcgtgacg
ccacagcataaagtcattcagcaagacggcccgtgttggttagctcgagttgaggcagat
gagcagtcatggcctaacaatgtcgagcaattgttgctaccacgtcatggcaatggggta
gatttagtcttattaatgatgcaattaggtaagcggcaaattaattctgtttgggttgaa
gccgggccacaatttgcgggcgcgcttttgcaggcgggtgtggttgatgagctaattctg
tatattgcgccaaaattgttaggcagcgatgcccgtgggttatgccagttgactgggtta
acgcaactaagtgatgcccctgaattcgtatttagcgaggttcgtcaggtggggccagac
ttacgactgcgcttgaaaccgaagtattaa

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