Yersinia frederiksenii: AW19_1926
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Entry
AW19_1926 CDS
T03606
Symbol
fadJ
Name
(GenBank) fatty oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00071
Fatty acid degradation
yfr00280
Valine, leucine and isoleucine degradation
yfr00310
Lysine degradation
yfr00362
Benzoate degradation
yfr00380
Tryptophan metabolism
yfr00410
beta-Alanine metabolism
yfr00640
Propanoate metabolism
yfr00650
Butanoate metabolism
yfr00907
Pinene, camphor and geraniol degradation
yfr00930
Caprolactam degradation
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
yfr01120
Microbial metabolism in diverse environments
yfr01200
Carbon metabolism
yfr01212
Fatty acid metabolism
Module
yfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AW19_1926 (fadJ)
00650 Butanoate metabolism
AW19_1926 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
AW19_1926 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AW19_1926 (fadJ)
00310 Lysine degradation
AW19_1926 (fadJ)
00380 Tryptophan metabolism
AW19_1926 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AW19_1926 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AW19_1926 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AW19_1926 (fadJ)
00930 Caprolactam degradation
AW19_1926 (fadJ)
Enzymes [BR:
yfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AW19_1926 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AW19_1926 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AW19_1926 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJI87274
LinkDB
All DBs
Position
complement(2108470..2110707)
Genome browser
AA seq
745 aa
AA seq
DB search
MSQENILNRGDEIAIVGSAVPAHSVFTLDVRPDNIGIITIDVVGDKVNTLKAEFAEQIAE
ILQQAQALSQLQGLVIISGKPDSFIAGADISMIAACRTAQDARVLAQKGQSILAQIAAFP
VPVVAAIHGACLGGGLELALACHSRICSQDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGV
SKALDMILTGRQVRGRQALKMGLVDDVVPHDILLDVAIQRAKAGWLDKPILPWQERLLSG
PLGKSLLFNIVRKKTRAKTKGHYPAAERIIDVVRKGLDHGGPAGYEAEAKAFGELAMSPE
SAALRSLFFATTALKKETGGKEQPRAIHRVGVLGGGLMGGGIANVTATRAGLPVRIKDIN
PTGINQALKYTWDTLGERVRSKRMRPAERQRQMMLISGSTDYCGFGNVDIVVEAVFEDLS
LKQQMVADIEHFAAPHTIFASNTSSLPISDIAAQAQRPEQVIGLHYFSPVDKMPLVEVIP
HAKTSEATIATTVALARKQGKTAIVVADCAGFYVNRILAPYINEAARCILDGEPIDLIDK
ALVDFGFPVGPITLLDEVGIDVGTKIMPILVEKLGARFAAPPSFDVILKDGRKGRKNGRG
FYLYPAKSSGFKWKKSSGKQVDTSVYTLLGVTPKAHLESAVIAQRCVMMMLNEAARCLDE
SIIRNPRDGDIGAVFGIGFPPFLGGPFRYMDNLGAETMVKTLSLLAQQYGERFEPCSLLV
TMAEQQQRFYPPENSMNERAVNPDN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggaaaatattcttaatcgcggggatgaaatagccatagttggctctgccgtt
ccggcccattcggttttcaccctcgatgttcggcccgataatattggtatcatcaccatt
gatgttgtcggtgataaagttaataccttaaaggctgaatttgcagagcaaattgctgaa
atactgcaacaagcgcaggctttgagtcaattacagggtttagttattatttctggcaaa
ccggactcttttatcgccggtgcagatatcagcatgattgctgcttgtcgcaccgcacaa
gatgcgcgtgttctggcccagaaagggcaatccattctggcacaaattgcggcatttcca
gtgccggtagtcgctgctatccacggggcttgcctcggcggtggtctggaactggcgctg
gcgtgtcatagccgcatttgctcgcaggatgataaaactgtgctcggtttgcctgaggta
cagcttgggctgttgccggggtccggtggcacccagcgtttgccgcgtctggtgggggtg
agtaaggcactggatatgatattgactggccggcaggttcgcggccgtcaggcacttaaa
atggggctggtggacgacgtggtgccgcacgatattttgcttgatgtggctatccagcgg
gctaaagccggttggcttgataagcccatcttgccgtggcaggagcgtttgcttagcggc
ccattaggtaaatcattgttatttaatattgttcgtaagaaaacacgggcaaagacaaaa
ggtcattatccagcagccgagcgtattattgatgtggtgcgtaaggggttagaccacggc
ggccctgcgggttatgaagccgaagcaaaagcctttggtgagctggcaatgtctcctgag
tcagcagcattacgcagcttgttttttgcgaccaccgcgctgaaaaaagagactggtggc
aaagaacagcctcgggctatccatcgagtcggggtattaggtggggggctgatgggcgga
ggtatagccaatgtgactgcaacacgtgcgggtttaccggttcggattaaagatatcaat
ccaacaggcattaaccaggcgctgaaatatacctgggataccttgggcgagcgggtgcgt
agcaagcggatgcgcccggcagagcggcaacgccagatgatgctgatttccggcagcact
gattattgtggctttggtaatgtggatattgtggttgaggcggtatttgaagatttgtcg
ttgaagcagcagatggtggcagatattgagcatttcgctgcacctcataccattttcgct
tccaacacttcgtcactgccgataagtgatatcgcggcacaggcacagcggccagagcag
gttatcggtctgcattactttagcccggtggataaaatgccattggtggaagttattccg
catgcaaagactagcgaagcaaccattgcaaccactgttgctttagcacgtaaacaggga
aaaacagcgattgtggtggcagattgtgccgggttctatgtaaaccgtattttggctcca
tacattaatgaagcagctcgctgtatattagatggtgaacctatcgatttaattgataag
gctctggtcgatttcggctttccggtaggcccgataaccttgttggatgaagttgggatt
gatgtgggcaccaagataatgcccattctggtagagaaattaggggcacgttttgctgcg
ccgccttcatttgatgtcattttgaaagatgggcggaaagggcgtaaaaatggccgcggt
ttctatctttatccagctaaaagtagcggtttcaagtggaagaaaagttccggtaagcaa
gtggacaccagcgtttataccttactcggtgtcacaccgaaggcccatctagaatctgcc
gtgatagcacagcgttgcgtcatgatgatgctgaatgaagccgcacgttgtctggatgaa
tctattatccgtaacccgcgcgatggggatattggtgcggtgtttgggattggtttccca
ccgtttttaggcgggcctttccgctatatggataacctgggcgcagaaacaatggtaaaa
acactgagtttgctcgcgcaacagtatggtgagcgctttgaaccttgctcattattggtc
acgatggctgagcagcaacaaaggttttatccgccggaaaatagtatgaatgagcgggca
gtcaatcccgataattaa
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