Yersinia frederiksenii: AW19_2429
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Entry
AW19_2429 CDS
T03606
Symbol
speC
Name
(GenBank) ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00330
Arginine and proline metabolism
yfr00480
Glutathione metabolism
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AW19_2429 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AW19_2429 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AW19_2429 (speC)
Enzymes [BR:
yfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AW19_2429 (speC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJI87080
LinkDB
All DBs
Position
complement(2610157..2612319)
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AA seq
720 aa
AA seq
DB search
MTQLKIATSARLASYVESQRGVVYLNQTDFTDVAAVVMSVEDASAGILSKLNDLGFAIPT
FIAVTAEQTVSTDYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MKNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNSFGFIGGIDAHCFDERYLRQQLAEVAPEHVNDTRPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIEARKLLLERCSMLRPFIPPTVGGKNWQDYDTDIIANDARFFNFVPNERWHG
FEGYNQDQYLVDPCKLLLTTPGIDANSGQYTQFGVPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENPAKMAHLVDMLAQFERYIEQDALLCDVLPTIYRKNEERYRGYTLRQLCQEMH
NLYVSHDVKQLQKDMFRKASFPPVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPY
PPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVEWRRIFGYVITQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttaaaaatagcaacaagtgctcgtttggcttcttatgtagaaagtcagcgg
ggagtggtatacctcaatcagaccgatttcacagatgttgccgccgtggtgatgtcggtg
gaagatgcgagtgccggtatattgtcgaagctcaatgatttgggttttgctattcctact
tttattgctgttacggcagaacagacggtttctacggattatttgccccttattaagggt
gtcatcacactcggtgaggcaaataaagcattttacaatgctcaggttgaggctgctgcc
agcgaatatcaaaaaaatctgttaccaccttttttctcaacattaaagaaatatgtcgag
atgaaaaattcaacctttgcttgccctgggcaccaaggtggtgagtttttccgtaaacat
cctgctggccgtcagttttttgaattctatggtgagacgattttccggtcagatatgtgt
aacgccgatgtcaaattgggtgacttgcttatccatgaaggtgcggcaaaagatgcacaa
aaatatgcagctaaggtctttaatgcagataaaacctattttgtactgaatgggacttca
tcggccaacaaagtggttactaatgctttattgacccgtggtgatttagtgttatttgat
agaaataaccataaatctaaccatcatggcgcactgattcaagcgggggcgacgccagtc
tatttagaaactgctcgtaattcatttggatttattggtggcatcgatgcgcactgtttc
gatgagcgttatttacgtcagcaactcgctgaagtggctcctgaacatgtgaatgataca
cggccattcagattggcaatcattcagttaggcacttatgatggcactgtgtataacgct
cgtcaggtggttgatagtattggtcatttatgtgattacattttgtttgattctgcgtgg
gtcggttatgagcaatttattccgatgatgaaggatttctcgccactattgctagaatta
aatgaaaatgaccctgggattattgtgactcagtcagtgcataagcagcaggctggtttc
tctcagacttctcaagtgcataaaaaagataaccatataaaagggcaaaaacgccactgt
aaccataagcgttttaacaatgcgtttatgctgcatgcatcaaccagcccgttttaccct
ttattcgccgcgttagatgtgaatgccaaaatacattccggcgacagtggccgccgcatg
tggatggattgtgtaaagctcggtattgaggcccgtaaattattattagagcgctgctca
atgttacggccattcattccacccactgtagggggtaagaattggcaggattacgataca
gatattattgctaatgatgctcgcttctttaattttgtgcctaatgagcgttggcatgga
tttgaaggttataatcaagatcaatacctagttgatccttgcaaattattgctaacaaca
ccaggtattgatgctaacagcgggcaatatacccaatttggtgtgccagcagcgatactg
gcaactttccttcgtgaaaatggtattgtgccggaaaaatgcgatctgaattcgatccta
ttcctgctgacaccggctgaaaacccggcaaaaatggctcatctggttgatatgttagcc
caatttgagcgctatattgagcaagatgcgctgttgtgcgatgtattaccgacgatatat
cgtaagaatgaagagcgctatcgtggctatactttgcgccagttatgccaggaaatgcat
aacttatatgtcagtcatgatgttaaacagttgcaaaaggatatgttccgtaaagccagt
ttcccacctgtcgtgatgaacccgcaggatgccaatattcagtttatccgcgataatatt
gaactgattcctattgctgaagcggaagggcgaattgcggctgaaggggctttgccttat
ccaccaggcgtgttgtgtgttgtgccgggtgaaatatggggtggggcggtgcagcgttat
ttcctggcgctggaagagggcatcaatttattgccgggcttctccccggaattgcagggc
gtttatatcgaaaaaggtgatgtagaatggcggcgtatttttggttatgtcattactcag
taa
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