Yersinia frederiksenii: AW19_3826
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Entry
AW19_3826 CDS
T03606
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00330
Arginine and proline metabolism
yfr00480
Glutathione metabolism
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AW19_3826
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AW19_3826
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AW19_3826
Enzymes [BR:
yfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AW19_3826
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJI85451
LinkDB
All DBs
Position
complement(4119693..4121858)
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AA seq
721 aa
AA seq
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MKKLNIAASTSAIPCFETQREVVDVLHTDFTDVAAVVLSVQDINNDVIENIHSLGLDIPI
FAAVCCEEELNTDVLPSLNGVFELCGDNTDFYGKQLESAAEKYEKELLPPFFNTLKKYVE
MGNSSFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIHSIAPERANQARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHKGKSGQRM
WLDCVKTGIEARKMILNTCKMIKPFVPVEVDGKPWQQYDTNAMAQDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLSEVLPTVYRNNETRYKGYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVVMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKN
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttaaatatcgcggcaagtacctcagcaataccctgctttgaaactcaacgc
gaagtagtagatgttttacacacagactttactgatgttgctgctgtggtgctttctgtt
caggatattaataatgatgtcattgaaaacattcattcattaggtctggatattcctatt
tttgcggcggtttgttgtgaagaagaactaaatactgatgtattaccgtctttaaatggg
gtgtttgagctgtgcggtgacaatactgatttttacggtaaacagctggaatccgccgct
gaaaaatatgagaaagaattattgccgcccttcttcaatacattaaaaaaatatgtagaa
atgggaaattcctcttttgcctgcccaggacaccaagggggccaattcttccgtaaacat
cccgctggccgtcaattctttgacttctacggcgaaactattttccgttctgatatgtgt
aatgctgacgtcaaattaggtgatttgcttattcatgaaggcgcaccttgtgatgctcaa
aaacatgcagcaaaagtatttaatgccgataaaacttatttcgtactgaacgggacttct
gcctcgaataaagtggccactaatgctctgttagcccgtggtgatctggtgctatttgac
cgtaataatcacaaatccaaccaccatggcgcactgattcaagctggggcaacaccggta
tatctggagactgcccgtaacccattcggctttatcggcggtattgacgcccactgtttc
gaagaaaaataccttcgtgaacaaatacatagcatcgctcctgagcgagccaatcaagct
cgcccattccgcctggccattattcaattggggacttatgacggcaccatttataatgct
cgtcaggtcgtggataaaattggtcacctttgcgattatattctgttcgactccgcttgg
gtgggctacgaacaatttattccgatgatgaaagattgttcaccattattacttgaactg
aatgaaaatgatccggggattatcgttacgcaatcagtacataaacaacaggctggtttc
tcacaaacttcgcaaattcataagaaagataaacatattaaaggtcaggaccgttattgt
aaccataagcgttttaataatgcctttatgctacacgcatccaccagcccattttatcca
ttattcgcggcattagatgttaatgccaaaatgcataaaggaaaaagtggccagcgcatg
tggttagattgtgttaagactggtattgaagcccgtaaaatgattttaaatacctgtaaa
atgattaagccttttgttccggtagaggttgatggtaaaccttggcaacaatatgacacc
aatgccatggcacaagatttacgcttctttaattttattccgggcgaaaaatggcatgct
tttgaaggctacgaagaatcacaatattttgttgacccatgcaaactattattaaccaca
cctgggattgataccaatactggcgaatatactgcatcgggtattccagcgactattcta
gctaacttcctgcgtgaaaatggcatcgtgccagaaaaatgtgaccttaactccatcctg
ttcttattaacgccagcagaagacttggcaaaaatgcaacacttggtggcgcaaattgct
cgttttgaacgttttattgaagaagatgcattattaagtgaggtattaccaactgtttat
cgtaataacgaaactcgttataaaggatataccatcggaaaactatgtcaggaaatgcat
gatctttatgtcagctatgatgtgaaacaactgcaaaaagaaatgttccgcaaacaatat
ttccctaaagtcgtgatgaatcctcaggatgccaatattgaattcgtccgtggacatgcc
gaattagtaccattgtgcaaagcagaaggtcgaattgccgctgaaggcgcacttccttac
ccaccgggagtattgtgtgttgtccctggtgaagtttggggcggcgcagctcaacgttat
ttcttggcacttgaagaaagtattaatttattgcccggttttgcacctgaattacaaggt
gtttatttacaagtcgatgaagacggatggaaccgtgcatacggctatatgatgaaaaat
aaataa
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