Yersinia hibernica: D5F51_01400
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Entry
D5F51_01400 CDS
T05961
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
yhi
Yersinia hibernica
Pathway
yhi00860
Porphyrin metabolism
yhi01100
Metabolic pathways
yhi01110
Biosynthesis of secondary metabolites
yhi01120
Microbial metabolism in diverse environments
yhi01240
Biosynthesis of cofactors
Module
yhi_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
yhi_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
D5F51_01400 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yhi04147
]
D5F51_01400 (hemB)
Enzymes [BR:
yhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
D5F51_01400 (hemB)
Exosome [BR:
yhi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
D5F51_01400 (hemB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QAX77344
UniProt:
A0A481Q8T0
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All DBs
Position
296688..297710
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AA seq
340 aa
AA seq
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MSYAFPGTFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGNNHQQAVSSMPGVS
RMTIDLLVKEAEAIAKLGVPVISLFPVIESGMKSLHAEEAYNPKGLVQRAVRALKDAVPE
LGILTDVALDPYTTHGQDGVIDADGYVINDITKEILVRQALSHAEAGAEIVAPSDMMDGR
IGAIRDQLELQGWVNTQIMAYSAKYASSYYGPFRDAIGSSSNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEKPTVMESLLCFKRAGADGVLTYFAKQVAQWLHDDQLQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcatttccgggcaccttccccggtcgccgtatgcgccgtgtgcgccgtcac
gatttcagtcgtcgactggtcgctgaaaatcagctaacagtcaatgatttgatctatccg
gtgtttgtcatggaaggaaacaaccatcagcaggccgtttcgtcgatgccgggagtctcg
cgtatgacgattgatttgttggtgaaggaagctgaggcgattgccaagcttggcgtcccg
gtcatatcgttattcccggttattgaatccggcatgaaatcattacatgcggaagaagct
tataacccgaaggggctggtgcaacgggcggttcgggcattaaaagacgcggtgccagaa
ttaggtattctgactgatgttgccctcgacccgtacaccactcatgggcaagatggtgtg
attgatgctgatggctatgtcattaacgatattaccaaagaaattttggttcgccaggca
ttgtcacatgccgaggctggcgctgaaattgttgccccgagcgatatgatggatggccgc
attggcgctattcgcgatcagttagagctgcaaggatgggtcaatacgcaaattatggcg
tactcggccaaatatgcctcgagctactatggcccattccgtgatgccattggttccagc
agtaacttgaaaggcggcaataaaaaaacttatcaaatggacccagccaacagtgatgaa
gcattgcaagagattgctcaggacttgcaggaaggggctgatatggtgatggtcaaacct
gggatgccctatctggatgtggtgcgtcgggtgaaagatacctttggggttccgaccttt
gcttatcaagtctctggtgaatatgcgatgcacatggctgccatccaaaatggctggcta
caagagaaaccgacggtgatggagtcattattgtgctttaaacgcgcgggtgccgatggg
gtattaacctattttgctaagcaagttgcccaatggttacatgacgatcaactgcagcgt
taa
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