Yersinia hibernica: D5F51_13905
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Entry
D5F51_13905 CDS
T05961
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
yhi
Yersinia hibernica
Pathway
yhi00730
Thiamine metabolism
yhi01100
Metabolic pathways
yhi01240
Biosynthesis of cofactors
yhi04122
Sulfur relay system
Module
yhi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D5F51_13905 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
D5F51_13905 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yhi03016
]
D5F51_13905 (thiI)
Enzymes [BR:
yhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
D5F51_13905 (thiI)
Transfer RNA biogenesis [BR:
yhi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D5F51_13905 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
QAX79556
UniProt:
A0A481QEY4
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All DBs
Position
complement(2922600..2924051)
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AA seq
483 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKNLEDDTLAVVRHWDHIEIRTKDDNL
GPQICEALTRVPGIHHILEVEDRSYTDMHNIFEQTLAAYRETLVGKTFCVRVKRRGKHEF
SSGDVERYVGGGLNQHIESAKVKLTHPQVTVHLEIDQDKLILIKARHEGLGGFPIGTQED
VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRF
VAIDFEPVVGEILEKIEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLT
NLRLIDNASDTLILRPLISHDKEHIINLAREIGTEDFAKTMPEYCGVISKSPTVKAVKAK
IEEEESHFDFSILDRVVSEAKNVDIREIAEQSREQLVEVETVAELTDSEVLLDIRAPDEQ
DEKPLKLDGIEIRALPFYKLSSQFADLDQSKTYLLYCDRGVMSRLQALYLREQGYSNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaagagtcaatctgtgcgattg
cgctttattaagatcctcacaaccaatatccgcaacgtattgaaaaaccttgaggacgat
actcttgcggttgttcgtcattgggatcatattgaaatccgcaccaaagatgacaatctc
ggcccacagatttgtgaggcgctaacccgcgttccggggatccaccatattcttgaagtg
gaagaccgcagctacaccgacatgcacaatatctttgagcaaacgctggcagcctaccgt
gaaacactggtcgggaaaactttctgtgtccgggtgaaacgccgtggtaagcatgaattt
tcttctggtgatgttgagcggtacgtcggtggcggtctgaatcaacatattgaaagtgcc
aaagtgaaactgacccatccgcaggtcactgtgcatttagagattgatcaagacaaactg
atacttatcaaagcgcgtcatgagggattaggtggcttcccgattggtacacaggaagat
gttttatccctgatttccggtggttttgactcgggtgtctccagctatatgctgatgcgc
cgggggtgccgggtgcattattgtttcttcaatcttggtggctccgcccatgaaattggc
gtgaagcaagtcgctcattatttgtggaatcgttttggcagttcccatcgggtgcgtttt
gttgctatcgattttgagccggtagtgggtgaaatcctcgaaaaaatcgaagacggtcag
atgggcgtggtgttaaaacgcatgatggtgcgtgctgcatctcaggttgctgaacgttac
ggtgttcaggcgttggtgaccggggaagcgctggggcaagtgtccagccagacactgact
aacttgcgcttgattgataatgcctctgacactcttatcttgcgcccgctgatttcgcac
gacaaagagcatatcatcaatttggcacgggaaatcggcaccgaagatttcgcgaaaacc
atgccagaatattgcggggttatttccaaaagcccaacagtgaaagcggttaaagccaag
attgaagaagaagagtctcactttgatttctccattctggaccgggtggtcagtgaagct
aaaaatgtcgacatccgtgaaatcgccgagcaaagtcgtgaacagctggttgaagttgaa
accgtcgccgaactgacggacagcgaagtattgctggacatccgcgcgccagatgagcag
gatgaaaagccactcaagctggatggtattgaaatacgggcgctacccttctataagctg
agttcgcaatttgccgatttagaccagagcaaaacctacctgttgtattgcgaccgcggt
gtgatgagccgtttgcaggcgctttatttgcgtgagcaggggtatagtaatgtgaaagtg
tatcgtccataa
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