Yinghuangia sp. ASG 101: LO772_23925
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Entry
LO772_23925 CDS
T07749
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yia03009
]
LO772_23925 (rimO)
Enzymes [BR:
yia01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LO772_23925 (rimO)
Ribosome biogenesis [BR:
yia03009
]
Prokaryotic type
ribosomal protein modification factors
LO772_23925 (rimO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UGQ09926
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Position
5581337..5582941
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AA seq
534 aa
AA seq
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MPAPRTASEERSVDHAAAAGPTTAGAGRTVALVTLGCARNEVDSEELAGRLEADGWRLTE
DAADAAVVLVNTCGFVESAKKDSIDTVLEAADLKKEGGPTQAVVAVGCMAERYGGELAGA
LPEADAVLGFDDYEDIAGRLRAILAGEKHTSHVPRDRRKLLPLSPVERQAAAGAVPGHGA
AARASSPDDLPSGVAPASGPRTLRKRLGGGPVASVKLASGCDRRCSFCAIPSFRGSFLSR
RPTDVVDEVRWLAGEGVREIVLVSENSTSYGKDLGDLRLLEALLPELAAVDGIERVRVNY
LQPAEMRPDLIGVLTGTDRVVPYFDLSFQHAAEPVLRRMRRFGSRGAFIDLLDRIRAEAP
EAGARSNFIVGFPGETEEDLDELTRFLTEARLDAIGVFGYSDEEGTEAAGYDGKLPDEEV
ARRLDRVSRLAEELTAQRAEERVGSEVTVLVEEIVGVDDDGLVTAEGRAAHQAPEIDGLT
VLHGRDLAVGTFVRARVVGSEGVDLYAEELEASVPGPVAGARDRTAAASSGPAR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccccgtaccgcctccgaagagcgttccgtcgaccacgccgccgcagcaggc
cccaccaccgccggcgccggacggacggtggcgttggtcacgctcggctgcgcccgcaac
gaggtcgactccgaggagttggccgggcgcctcgaagccgacggctggcggctgaccgag
gacgccgccgacgcggccgtggtcctggtcaacacctgcggattcgtggagtccgcgaag
aaggactccatcgacaccgtgctcgaagccgccgacctcaagaaggaaggcggccccaca
caggccgtcgtcgcggtcggctgcatggccgagcgctacgggggcgaactcgcgggcgcg
ctgcccgaggccgacgccgtgctcggcttcgacgactacgaggacatcgccggacgcctc
cgcgcgatcctcgcgggggagaagcacacctcgcacgtgccgcgcgaccgcaggaagctg
ctcccgctcagccccgtcgaacgccaggccgctgccggtgcggtgcccggccacggagcc
gccgcccgcgcgtcgtcacccgacgacctgccctcgggcgtcgccccggcctccgggccg
cggacgctccgcaagcgtctcggcggcgggccggtggcgtccgtcaagctcgcgtccgga
tgcgaccggcggtgctcgttctgcgcgatcccgtcgttccgcggctcgttcctctcccgc
cgcccgaccgacgtcgtcgacgaggtccgctggctcgccggcgagggagtccgcgagatc
gtgctggtgagcgagaactccacgtcgtacggcaaggacctcggcgacctgcgcctgctt
gaggccctgctgcccgagctggcggccgtcgacggcatcgagcgcgtgcgggtcaactac
ctgcagcccgccgagatgcgccccgacctgatcggcgtgctgaccgggaccgaccgcgtc
gtgccctacttcgacctgtccttccagcacgccgccgagccggtgctgcgccgcatgcgc
cgtttcggctcacggggcgccttcatcgatctcctcgatcggatccgtgccgaagccccc
gaggcgggggcgcgttcgaacttcatcgtcgggttccccggggagaccgaggaagacctc
gacgagctgacgcgcttcctcaccgaggcccggctcgacgccatcggcgtcttcggctac
tccgacgaggagggcaccgaagcggcgggatacgacggcaagttgcccgacgaggaggtc
gcccggcggctcgaccgggtctcccgtctcgccgaagagctgaccgcgcagcgggcggag
gaacgcgtcggcagcgaagtcaccgtgctggtcgaggagatcgtcggcgtcgacgacgac
ggcctggtgaccgccgagggccgcgccgcgcaccaggcccccgagatcgacgggctgacg
gtgctgcacggccgcgacctcgcggtcgggacgttcgtgcgcgcccgcgtcgtcggcagc
gaaggcgtcgacctgtacgccgaggagctggaggcttccgtgcccgggcccgtcgcgggc
gcccgcgaccgcaccgccgccgcgtcgtcggggcccgcgcggtga
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