Yimella sp. cx-51: J5M86_07935
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Entry
J5M86_07935 CDS
T07124
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00260
Glycine, serine and threonine metabolism
yim00630
Glyoxylate and dicarboxylate metabolism
yim00785
Lipoic acid metabolism
yim01100
Metabolic pathways
yim01110
Biosynthesis of secondary metabolites
yim01200
Carbon metabolism
Module
yim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J5M86_07935 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J5M86_07935 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
J5M86_07935 (gcvP)
Enzymes [BR:
yim01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
J5M86_07935 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QTH36876
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Position
complement(1672628..1675498)
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AA seq
956 aa
AA seq
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MTSQNTPDFVSRHIGPAQDEVDTMLKTIGYSSVSELIDRAIPGTIRMSDALDVVVAPSEA
AVLAELRDKAGRNQVLTSMIGLGYYGTHTPGVIKRNILENPAWYTAYTPYQPEISQGRLE
ALLNFQTVVADLTGLQTSSASLLDEGTAVAEAMSLMHRSTRAKDDSVLLVDAQVLPQSIA
VTQTRADAVGIELVVADLRSISTADELRAAAGERPVFGVVVQYPNANGEIVDWSALASAT
HEAGGLVTAAADLLALTLLKSPGEWGADIAVGTSQRFGVPMGFGGPHAGYMCVREGLERN
LPGRLVGVSVDADGAPAFRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPAG
LRRIASEVHGKAVGLAAVLRAGGADLVADSFFDTLTVSVEGRADSVVEAALDRGINIWRV
DADHVSVSVDETTTDEELAGVAAAFGVNAPVPADGEPTFAASLVRESEYLGHPVFNSHHS
ETQMLRYLRSLSDRDYALDRGMIPLGSCTMKLNATTEMESVTWPEFANLHPFAPAEQTVG
IRELVGELEQWLCAITGYDAVSLQPNAGSQGEFAGLLAIHAYHESNGDSHRNVCLIPASA
HGTNAASAAMAGLKVVVVKTAPTGEIDMDDLKLKLKQHGENLAAIMVTYPSTHGVYEDTI
TELCDLVHEAGGQVYVDGANLNALVGMAQPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPV
GVRAHLAPFLPNHPLSAHAGPETGVGPISAAPFGSASILPISWAYVRLMGGEGLTEATEA
AVVNANYIAKRLDEHFPVLYTGEGGLVAHECILDLRGLTKDSGVTVDDVAKRLIDFGFHA
PTMSFPVAGTLMVEPTESESLEEIDRFCDAMIAIRAEIQEVIDGKVPAQDSVLRHAPHTA
RSLVGDWDHPYSREDAVYPAGLDPLRKYWAPVRRVDGAYGDRNLICSCPSPEAYED
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccagaacacccccgatttcgtcagccgtcacatcggcccggcccaggacgag
gtcgacacgatgctcaagacaatcggttattccagtgtgtccgaactcatcgaccgcgcc
atccccggcacgatccggatgtcggacgctctcgatgtcgtggtcgcccccagcgaagcg
gccgtgctggctgagctgcgcgacaaggccggtcgtaaccaggtgctgacctcgatgatc
ggtctgggctactacggcacccacacgccgggtgtcatcaagcgcaacatcctcgagaat
cccgcctggtacaccgcttacacgccctaccagcccgagatctcacaggggcggctcgag
gccctgctcaacttccagacggtggtcgccgacctcaccggtctgcagacctcctcagcg
agcctgctggacgagggcacggcggtcgccgaggcgatgtcgttgatgcaccgttccacc
cgtgccaaggacgactcggtgctgttggtcgacgcgcaggtgttgccgcagtcgatcgcg
gtcacccagacacgcgccgacgccgtcggcatcgaactcgtggtcgccgatctgcgttcg
atctccaccgccgatgaactgcgtgccgctgctggtgaacgtccggtcttcggtgtcgtg
gtgcagtacccgaacgccaacggcgagatcgtcgactggagtgccctggcatccgcaacc
cacgaggcgggtggcctcgtgaccgccgcagcagacctgcttgcgctcaccctgctgaag
tcgccgggggagtggggcgccgacatcgccgtcggcaccagccagcgcttcggtgttccg
atgggcttcggcggcccgcacgcgggatacatgtgtgtgcgcgagggcctcgagcgcaac
ctcccgggccggctcgtcggtgtctcggtcgacgccgatggcgcacccgcgttccgcctg
gctctgcagacgcgtgagcagcacatccggcgggaaaaggccaccagcaacatctgcacc
gctcaggtgctcctggcggtgatggcctcgatgtacgccgtctaccacggacccgccggc
ctgcgccgcatcgcctccgaggtgcacggcaaggcagtcggcctggcagcagtgctccgt
gcaggtggagccgacctcgtcgctgacagcttcttcgacaccctcaccgtttccgtcgag
ggacgcgccgactccgtcgtcgaggcggcccttgatcggggtatcaacatctggcgggtc
gacgcagaccacgtgagcgtgagcgtcgacgagaccacgacagacgaagaactcgccggt
gtcgcggcagccttcggtgtcaacgcgcccgtaccggctgatggtgagccgacctttgct
gcgtccctggtccgcgagtccgagtacctgggtcatccggtgttcaactcccaccacagc
gagacgcagatgctgcgttacctgcgctcgttgtccgatcgcgactacgccctcgaccgc
ggaatgattccgctcggctcgtgcacgatgaagctcaacgccaccaccgagatggagtcg
gtgacttggccggagttcgccaacctgcacccgttcgcgcccgcggagcagaccgtcggc
attcgtgaactggtcggcgaactcgagcaatggctgtgtgcgatcaccggttacgacgcg
gtctcgctgcagccgaacgccggatcgcagggagagttcgccggcctgctggcgatccac
gcctaccacgagtcgaacggcgacagccaccgcaatgtctgcctgatcccggcatcggcc
cacggcaccaacgctgcctcggccgcgatggccggcctgaaggtcgtggtggtcaagacc
gctccgaccggtgagatcgacatggacgacctgaagctgaagctcaagcaacacggcgag
aacctcgccgcgatcatggtcacctatccctcgacgcacggtgtgtacgaggacaccatc
acggagttgtgcgacctcgtgcacgaagccggcggccaggtgtatgtcgatggtgccaac
ctcaacgccctggtcggcatggcgcagccgggcaagttcggtggcgacgtgtcgcacctg
aacctgcacaagacgttctgcatcccgcacggtggcggtggccccggtgtcggtccggtg
ggtgtgcgcgcgcacctcgcgccgttcctgccgaaccacccgctgtcggcacacgccggc
ccggagaccggagtcggtccgatctcggccgcgcccttcggttcggcctcgatcctgccg
atctcctgggcctatgtgcggctcatgggcggcgagggcctcaccgaagccaccgaggca
gctgtggtcaacgccaactacatcgccaagcgtctggacgagcacttcccggtgctctac
accggcgaaggcggcctcgttgcgcacgagtgcatcctcgacctgcgcggtttgacgaag
gactccggcgtcacggttgacgacgtggccaagcgcctcatcgacttcggcttccacgca
cccacgatgtccttccccgttgcgggcacgctcatggtggagccgaccgagtcagagtcg
ctggaggagatcgaccgcttctgcgacgccatgatcgcgattcgtgccgagatccaggaa
gtcatcgacggcaaggtgccggcgcaggacagcgtcctgcggcacgcaccgcacaccgcc
cgcagtctggtcggcgactgggaccacccgtactcacgtgaggacgcggtctacccggca
ggcctcgacccgttgcgtaagtactgggcgccggtgcgccgggtcgacggtgcgtacggc
gaccgcaacctgatctgctcgtgcccgtcgccggaggcgtacgaggactga
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